Strain Fitness in Pseudomonas simiae WCS417 around PS417_18040
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,931,443 | + | PS417_18035 | 0.54 | +0.6 | |
3,931,443 | + | +0.9 | |||
3,931,444 | - | PS417_18035 | 0.54 | +1.1 | |
3,931,444 | - | PS417_18035 | 0.54 | +0.6 | |
3,931,444 | - | PS417_18035 | 0.54 | -0.2 | |
3,931,720 | - | PS417_18035 | 0.67 | +1.1 | |
3,931,720 | - | PS417_18035 | 0.67 | -1.9 | |
3,931,843 | - | PS417_18035 | 0.73 | +0.9 | |
3,931,947 | + | PS417_18035 | 0.77 | -0.6 | |
3,932,083 | - | PS417_18035 | 0.84 | -0.3 | |
3,932,454 | + | -0.8 | |||
3,932,894 | - | PS417_18040 | 0.90 | -0.7 | |
3,933,382 | + | PS417_18045 | 0.73 | +0.1 | |
3,933,562 | + | +0.6 |
Or see this region's nucleotide sequence