Strain Fitness in Pseudomonas simiae WCS417 around PS417_15785

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,459,639	+				+0.0
3,459,640	-				+1.4
3,459,640	-				+1.3
3,459,705	-		PS417_15780	0.11	+0.2
3,459,750	+		PS417_15780	0.22	-0.7
3,459,751	-		PS417_15780	0.22	-0.6
3,459,767	+				+0.8
3,459,921	+		PS417_15780	0.60	-0.2
3,459,922	-		PS417_15780	0.60	-0.2
3,460,086	+				-0.0
3,460,086	+				-0.2
3,460,087	-				+0.4
3,460,091	-				-0.8
3,460,193	-				-0.6
3,460,301	-				-0.4
3,460,372	+		PS417_15785	0.15	+0.1
3,460,372	+		PS417_15785	0.15	+0.3
3,460,373	-		PS417_15785	0.15	-0.0
3,460,373	-		PS417_15785	0.15	-0.1
3,460,373	-		PS417_15785	0.15	-0.7
3,460,373	-		PS417_15785	0.15	-0.2
3,460,373	-		PS417_15785	0.15	-0.8
3,460,420	+		PS417_15785	0.19	-0.1
3,460,421	-		PS417_15785	0.19	-0.1
3,460,421	-		PS417_15785	0.19	+0.1
3,460,421	-		PS417_15785	0.19	+0.0
3,460,426	+		PS417_15785	0.19	+0.1
3,460,426	+		PS417_15785	0.19	-0.9
3,460,426	+		PS417_15785	0.19	+0.2
3,460,426	+		PS417_15785	0.19	+0.4
3,460,426	+		PS417_15785	0.19	-0.2
3,460,426	+		PS417_15785	0.19	-0.0
3,460,426	+				+1.8
3,460,427	-		PS417_15785	0.19	-0.8
3,460,427	-		PS417_15785	0.19	-0.1
3,460,427	-		PS417_15785	0.19	-0.5
3,460,427	-		PS417_15785	0.19	+0.2
3,460,427	-		PS417_15785	0.19	+0.4
3,460,427	-		PS417_15785	0.19	+0.2
3,460,427	-		PS417_15785	0.19	+0.1
3,460,427	-				-0.8
3,460,588	+		PS417_15785	0.32	+0.6
3,460,588	+		PS417_15785	0.32	-1.2
3,460,588	+		PS417_15785	0.32	+0.1
3,460,667	-		PS417_15785	0.38	-0.6
3,460,766	+		PS417_15785	0.45	-1.6
3,460,816	+		PS417_15785	0.49	+1.0
3,460,816	+		PS417_15785	0.49	-0.5
3,460,817	-		PS417_15785	0.49	-2.8
3,460,819	+		PS417_15785	0.49	+0.4
3,460,819	+		PS417_15785	0.49	+0.8
3,460,820	-		PS417_15785	0.49	-0.3
3,460,871	-		PS417_15785	0.53	-2.0
3,461,248	+				+2.8
3,461,306	-		PS417_15785	0.86	+0.8
3,461,374	+				-0.8
3,461,374	+				-2.0
3,461,375	-				-1.8
3,461,378	-				+0.2
3,461,587	-				-0.3
3,461,588	+				-0.2
3,461,588	+				-1.2
3,461,588	+				-1.4
3,461,589	-				-0.5
3,461,589	-				-0.4
3,461,589	-				+0.4
3,461,671	+				+1.4
3,461,865	-		PS417_15790	0.33	-0.8
3,461,971	+		PS417_15790	0.52	-0.4
3,461,972	-		PS417_15790	0.53	+0.0
3,461,972	-		PS417_15790	0.53	+0.1
3,461,972	-		PS417_15790	0.53	+0.6
3,462,102	+		PS417_15790	0.76	+1.6
3,462,466	-		PS417_15795	0.45	-0.8