Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15740 and PS417_15745 are separated by 73 nucleotides PS417_15745 and PS417_15750 overlap by 7 nucleotides PS417_15750 and PS417_15755 are separated by 10 nucleotides
PS417_15740: PS417_15740 - hypothetical protein, at 3,452,674 to 3,453,321
_15740
PS417_15745: PS417_15745 - lipid carrier protein, at 3,453,395 to 3,453,856
_15745
PS417_15750: PS417_15750 - protease, at 3,453,850 to 3,454,740
_15750
PS417_15755: PS417_15755 - protease, at 3,454,751 to 3,455,746
_15755
Position (kb)
3453
3454
3455 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3453.176 kb on - strand, within PS417_15740 at 3453.183 kb on + strand, within PS417_15740 at 3453.183 kb on + strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.252 kb on + strand at 3453.253 kb on - strand, within PS417_15740 at 3453.463 kb on + strand, within PS417_15745 at 3453.539 kb on - strand, within PS417_15745 at 3453.539 kb on - strand at 3453.752 kb on - strand at 3454.142 kb on + strand at 3454.382 kb on + strand, within PS417_15750 at 3454.543 kb on + strand, within PS417_15750 at 3454.644 kb on - strand, within PS417_15750 at 3454.680 kb on - strand at 3454.710 kb on - strand at 3454.909 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.206 kb on - strand, within PS417_15755 at 3455.443 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.563 kb on - strand, within PS417_15755 at 3455.669 kb on + strand at 3455.670 kb on - strand at 3455.673 kb on + strand at 3455.674 kb on - strand at 3455.674 kb on - strand at 3455.674 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 3,452,908 + PS417_15740 0.36 +0.5 3,452,908 + PS417_15740 0.36 +0.6 3,452,908 + PS417_15740 0.36 -0.2 3,452,908 + PS417_15740 0.36 -1.1 3,452,908 + PS417_15740 0.36 +1.2 3,452,908 + PS417_15740 0.36 +0.5 3,452,909 - PS417_15740 0.36 -0.1 3,452,909 - PS417_15740 0.36 +0.3 3,452,909 - PS417_15740 0.36 +1.8 3,452,909 - PS417_15740 0.36 -1.0 3,453,176 - PS417_15740 0.77 -0.2 3,453,183 + PS417_15740 0.79 -0.1 3,453,183 + PS417_15740 0.79 -0.4 3,453,199 - PS417_15740 0.81 -0.4 3,453,199 - PS417_15740 0.81 -1.3 3,453,199 - PS417_15740 0.81 -1.0 3,453,252 + -0.8 3,453,253 - PS417_15740 0.89 -0.3 3,453,463 + PS417_15745 0.15 -0.1 3,453,539 - PS417_15745 0.31 -0.6 3,453,539 - -1.5 3,453,752 - -0.8 3,454,142 + -0.8 3,454,382 + PS417_15750 0.60 -0.8 3,454,543 + PS417_15750 0.78 -0.3 3,454,644 - PS417_15750 0.89 -1.0 3,454,680 - +1.0 3,454,710 - +0.5 3,454,909 - PS417_15755 0.16 +0.5 3,455,206 - PS417_15755 0.46 -0.2 3,455,206 - PS417_15755 0.46 +0.4 3,455,443 - PS417_15755 0.69 -0.4 3,455,563 - PS417_15755 0.82 +0.3 3,455,563 - PS417_15755 0.82 +0.4 3,455,563 - PS417_15755 0.82 -0.8 3,455,563 - PS417_15755 0.82 +0.6 3,455,563 - PS417_15755 0.82 +0.8 3,455,669 + +0.4 3,455,670 - +0.8 3,455,673 + -1.8 3,455,674 - -0.9 3,455,674 - -0.6 3,455,674 - -1.1
Or see this region's nucleotide sequence