Strain Fitness in Pseudomonas simiae WCS417 around PS417_14655
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,202,058 | + | +1.2 | |||
3,202,059 | - | +0.7 | |||
3,202,235 | - | -1.5 | |||
3,202,505 | + | PS417_14655 | 0.37 | -0.7 | |
3,203,040 | + | PS417_14660 | 0.13 | +0.7 | |
3,203,041 | - | PS417_14660 | 0.13 | +1.4 | |
3,203,053 | - | -0.8 | |||
3,203,124 | + | PS417_14660 | 0.26 | +0.4 | |
3,203,159 | + | -0.2 | |||
3,203,406 | + | PS417_14660 | 0.69 | -2.4 | |
3,203,406 | + | PS417_14660 | 0.69 | +0.0 | |
3,203,407 | - | PS417_14660 | 0.69 | -1.1 | |
3,203,464 | - | PS417_14660 | 0.77 | +0.2 | |
3,203,475 | + | PS417_14660 | 0.79 | -0.5 | |
3,203,562 | + | +0.9 | |||
3,203,562 | + | +0.1 | |||
3,203,563 | - | -0.1 | |||
3,203,611 | + | +0.4 | |||
3,203,612 | - | -0.5 | |||
3,203,722 | + | +0.2 | |||
3,203,746 | + | +0.9 |
Or see this region's nucleotide sequence