Strain Fitness in Pseudomonas simiae WCS417 around PS417_14355

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
3,139,617	+				+0.4
3,139,622	+				+0.3
3,139,623	-				-1.0
3,139,626	-				-1.9
3,139,754	-		PS417_14350	0.18	+0.0
3,139,820	-		PS417_14350	0.26	+0.1
3,139,822	-		PS417_14350	0.26	-0.1
3,139,822	-		PS417_14350	0.26	-0.3
3,139,986	+		PS417_14350	0.46	+0.4
3,140,119	+		PS417_14350	0.62	-0.1
3,140,119	+		PS417_14350	0.62	+0.0
3,140,167	+		PS417_14350	0.68	-0.5
3,140,168	-		PS417_14350	0.68	-0.2
3,140,272	+		PS417_14350	0.80	-1.0
3,140,272	+		PS417_14350	0.80	+0.7
3,140,273	-		PS417_14350	0.81	+0.2
3,140,273	-		PS417_14350	0.81	+1.8
3,140,351	-				-0.8
3,140,575	+		PS417_14355	0.15	-0.7
3,140,648	+		PS417_14355	0.24	+0.4
3,140,938	+		PS417_14355	0.62	-1.0
3,140,939	-		PS417_14355	0.62	+1.1
3,140,939	-		PS417_14355	0.62	-0.2
3,140,948	-		PS417_14355	0.64	-0.7
3,141,046	-		PS417_14355	0.76	-2.2
3,141,046	-		PS417_14355	0.76	-0.2
3,141,046	-		PS417_14355	0.76	-1.3
3,141,186	+				-0.2
3,141,187	-				+2.1
3,141,209	+				-0.2
3,141,209	+				+0.4
3,141,224	-				+0.2
3,141,232	+				+0.6
3,141,232	+				+0.2
3,141,233	-				-0.2
3,141,308	-				+2.4
3,141,444	+		PS417_14360	0.22	+0.4
3,141,445	-		PS417_14360	0.22	+0.3
3,141,445	-		PS417_14360	0.22	+0.4
3,141,518	+		PS417_14360	0.35	-0.5
3,141,518	+		PS417_14360	0.35	-1.5
3,141,519	-		PS417_14360	0.36	-0.1
3,141,528	-		PS417_14360	0.37	-2.1
3,141,563	+		PS417_14360	0.44	-1.7
3,141,669	-		PS417_14360	0.63	+1.3
3,141,745	-		PS417_14360	0.77	+0.1
3,141,787	+				+0.8
3,141,821	+				-0.2
3,141,900	+				+1.0
3,141,900	+				-0.9
3,141,901	-				+0.2
3,142,108	-		PS417_14365	0.80	+0.3
3,142,156	-				-0.3
3,142,159	+				-0.0
3,142,160	-				+0.7