Strain Fitness in Pseudomonas simiae WCS417 around PS417_11930

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
2,595,294	+				+0.3
2,595,314	-				-0.7
2,595,400	+				+0.7
2,595,400	+				+0.4
2,595,401	-				-0.3
2,595,401	-				-0.2
2,595,406	-				-1.8
2,595,610	-		PS417_11925	0.88	+0.0
2,595,610	-		PS417_11925	0.88	+0.0
2,595,612	+		PS417_11925	0.89	-0.3
2,595,612	+		PS417_11925	0.89	+0.4
2,595,663	+				+0.2
2,595,663	+				+0.3
2,595,663	+				-0.7
2,595,664	-				-0.3
2,595,754	-				-0.2
2,595,756	+				+0.0
2,595,757	-				+1.4
2,595,757	-				-3.1
2,595,799	+				+1.2
2,595,799	+				+0.3
2,595,800	-				+1.3
2,595,832	+				+2.7
2,595,942	+				+0.0
2,595,942	+				+1.0
2,595,942	+				-0.1
2,595,943	-				-0.5
2,595,943	-				-1.8
2,596,009	-				-1.8
2,596,087	-				-0.2
2,596,165	+		PS417_11930	0.19	-1.1
2,596,165	+		PS417_11930	0.19	-1.0
2,596,165	+		PS417_11930	0.19	-1.0
2,596,166	-				-0.7
2,596,191	+		PS417_11930	0.25	-0.5
2,596,191	+		PS417_11930	0.25	-1.2
2,596,191	+		PS417_11930	0.25	-1.3
2,596,192	-		PS417_11930	0.25	-2.7
2,596,192	-		PS417_11930	0.25	-0.7
2,596,192	-		PS417_11930	0.25	-1.3
2,596,195	+		PS417_11930	0.25	-1.2
2,596,195	+		PS417_11930	0.25	+0.4
2,596,195	+		PS417_11930	0.25	+0.4
2,596,196	-		PS417_11930	0.26	-1.7
2,596,196	-		PS417_11930	0.26	-1.3
2,596,363	+		PS417_11930	0.61	-1.9
2,596,544	-				+0.1
2,596,586	+				-1.8
2,596,587	-				-1.8
2,596,589	+				-0.3
2,596,589	+				+0.7
2,596,590	-				-0.4
2,596,605	+				-0.7
2,596,605	+				-1.4
2,596,609	+				+1.8
2,596,609	+				-0.3
2,596,610	-				-1.2
2,596,628	+				-0.5
2,596,629	-				+0.1
2,596,629	-				-0.7
2,596,862	-		PS417_11935	0.18	-0.1
2,597,000	-		PS417_11935	0.32	-0.4
2,597,223	-		PS417_11935	0.53	+1.0
2,597,240	+		PS417_11935	0.55	-1.7
2,597,240	+		PS417_11935	0.55	+0.0
2,597,241	-		PS417_11935	0.55	-0.1
2,597,241	-		PS417_11935	0.55	-0.6
2,597,241	-		PS417_11935	0.55	-0.5
2,597,324	+		PS417_11935	0.63	+0.0
2,597,324	+		PS417_11935	0.63	+0.8
2,597,324	+		PS417_11935	0.63	-0.1
2,597,325	-		PS417_11935	0.64	-0.2
2,597,327	+		PS417_11935	0.64	-0.1