Strain Fitness in Pseudomonas simiae WCS417 around PS417_11830

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
2,573,046	-				+0.1
2,573,046	-				-0.1
2,573,220	+				+0.9
2,573,398	-		PS417_11825	0.57	+0.9
2,573,609	+		PS417_11825	0.88	+0.4
2,573,610	-		PS417_11825	0.88	+0.9
2,573,610	-		PS417_11825	0.88	-0.0
2,573,683	+				+0.4
2,573,696	-				+0.5
2,573,699	-				-1.7
2,573,752	-				+0.1
2,573,994	+				+0.7
2,573,995	-				-0.4
2,573,995	-				-1.1
2,574,325	+		PS417_11830	0.33	-0.8
2,574,526	+		PS417_11830	0.55	-1.3
2,574,526	+		PS417_11830	0.55	-0.3
2,574,656	-		PS417_11830	0.69	-2.8
2,574,727	+		PS417_11830	0.77	-1.0
2,574,905	-				+0.5
2,574,905	-				-1.1
2,574,905	-				+0.2
2,574,905	-				-1.0
2,574,905	-				+0.6
2,574,905	-				+0.6
2,574,905	-				-0.3
2,575,071	+				+0.2
2,575,299	+		PS417_11835	0.20	+0.1
2,575,321	+		PS417_11835	0.22	+0.2
2,575,515	-		PS417_11835	0.38	+0.1
2,575,570	-		PS417_11835	0.43	-2.9
2,575,589	+		PS417_11835	0.44	-0.1
2,575,718	+		PS417_11835	0.55	+0.6
2,575,719	-		PS417_11835	0.55	+0.3
2,575,887	-		PS417_11835	0.69	+0.9