Strain Fitness in Pseudomonas simiae WCS417 around PS417_11765
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,559,690 | - | PS417_11760 | 0.81 | +0.9 | |
2,560,051 | - | +0.6 | |||
2,560,079 | + | -0.9 | |||
2,560,079 | + | +0.4 | |||
2,560,092 | - | +0.0 | |||
2,560,307 | + | -0.3 | |||
2,560,308 | - | -0.3 | |||
2,560,308 | - | -1.5 | |||
2,560,399 | + | +0.2 | |||
2,560,400 | - | +1.1 | |||
2,560,621 | + | PS417_11765 | 0.27 | -0.8 | |
2,560,622 | - | PS417_11765 | 0.27 | -0.1 | |
2,560,641 | - | PS417_11765 | 0.29 | -2.0 | |
2,560,892 | - | PS417_11765 | 0.54 | -1.4 | |
2,561,075 | + | PS417_11765 | 0.73 | +0.9 | |
2,561,076 | - | PS417_11765 | 0.73 | -0.3 | |
2,561,116 | + | PS417_11765 | 0.77 | -0.2 | |
2,561,320 | + | -0.5 | |||
2,561,339 | - | +0.0 | |||
2,561,347 | + | -0.3 | |||
2,561,347 | + | -0.3 | |||
2,561,382 | + | +1.2 | |||
2,561,444 | + | +0.1 | |||
2,561,922 | + | PS417_11770 | 0.55 | -0.8 | |
2,561,922 | + | PS417_11770 | 0.55 | -1.7 | |
2,561,955 | + | PS417_11770 | 0.58 | -0.0 | |
2,561,955 | + | +1.5 | |||
2,562,315 | + | -1.3 | |||
2,562,316 | - | +0.0 |
Or see this region's nucleotide sequence