Strain Fitness in Pseudomonas simiae WCS417 around PS417_10725

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
2,290,443	+		PS417_10715	0.78	-0.6
2,290,443	+		PS417_10715	0.78	+0.3
2,290,443	+		PS417_10715	0.78	-1.6
2,290,445	+		PS417_10715	0.78	-0.1
2,290,528	-				+0.8
2,290,541	+				-0.0
2,290,570	-				-0.6
2,290,587	+				-0.1
2,290,587	+				+0.0
2,290,587	+				-0.6
2,290,588	-				+0.7
2,290,588	-				+0.1
2,290,589	+				+0.5
2,290,589	+				-0.6
2,290,589	+				+0.5
2,290,590	-				+0.5
2,290,591	+				+0.3
2,290,591	+				+0.0
2,290,591	+				-0.5
2,290,591	+				+0.4
2,290,591	+				+1.4
2,290,591	+				-0.1
2,290,591	+				-0.1
2,290,591	+				+0.7
2,290,591	+				+0.2
2,290,592	-				+0.2
2,290,592	-				+0.3
2,290,592	-				+0.5
2,290,592	-				-0.2
2,290,592	-				-1.1
2,290,592	-				+1.0
2,290,592	-				+0.6
2,290,592	-				+0.4
2,290,592	-				+0.7
2,290,593	+				+0.2
2,290,593	+				+0.4
2,290,593	+				+0.3
2,290,593	+				-0.6
2,290,593	+				+1.7
2,290,594	-				-0.1
2,290,594	-				+0.3
2,290,594	-				+2.4
2,290,609	-				+0.4
2,290,609	-				+0.3
2,290,649	+				-0.0
2,290,650	-				+2.2
2,290,650	-				+1.5
2,290,650	-				+3.3
2,290,650	-				+1.2
2,290,651	+				-1.2
2,290,652	-				+1.9
2,290,652	-				+1.3
2,290,682	-				+1.7
2,290,692	+				+1.0
2,290,717	+				+1.4
2,290,717	+				+1.2
2,290,726	+				+1.3
2,290,761	+				+1.5
2,290,761	+		PS417_10720	0.13	+1.2
2,290,762	-		PS417_10720	0.13	+2.9
2,291,045	+		PS417_10720	0.57	+1.0
2,291,045	+		PS417_10720	0.57	+1.2
2,291,045	+		PS417_10720	0.57	+1.4
2,291,050	-		PS417_10720	0.58	+2.1
2,291,412	+				+0.4
2,291,413	-				+0.9
2,291,413	-				+0.3
2,291,454	+				+0.4
2,291,454	+				-1.0
2,291,615	+		PS417_10725	0.16	-1.3
2,291,629	-		PS417_10725	0.17	-1.5
2,291,700	+		PS417_10725	0.21	-0.5
2,291,701	-		PS417_10725	0.21	-1.6
2,291,701	-		PS417_10725	0.21	-0.4
2,292,023	-		PS417_10725	0.39	-2.2
2,292,223	-		PS417_10725	0.50	-0.5
2,292,226	-		PS417_10725	0.50	-0.6
2,292,226	-		PS417_10725	0.50	-0.5
2,292,835	-		PS417_10725	0.83	+1.7
2,292,835	-		PS417_10725	0.83	-2.1
2,293,119	+				-0.7
2,293,140	+				-0.3
2,293,141	-				-0.2
2,293,141	-				+2.3
2,293,153	+				-0.4
2,293,256	+				-0.8
2,293,262	+				-0.1
2,293,262	+				-0.6
2,293,264	+				+0.5
2,293,265	-				-0.4
2,293,450	-		PS417_10730	0.17	-0.2
2,293,450	-		PS417_10730	0.17	-0.3
2,293,450	-		PS417_10730	0.17	-0.9
2,293,517	+		PS417_10730	0.22	-0.1
2,293,517	+		PS417_10730	0.22	-0.8
2,293,518	-		PS417_10730	0.22	-0.4
2,293,518	-				+0.9
2,293,520	-		PS417_10730	0.22	+0.0
2,293,549	-		PS417_10730	0.24	-0.4
2,293,549	-				+0.9
2,293,555	+				+1.4
2,293,556	-		PS417_10730	0.24	+0.8
2,293,675	-		PS417_10730	0.33	-0.6
2,293,714	-		PS417_10730	0.35	-1.9
2,293,780	+		PS417_10730	0.40	+0.2
2,293,784	+		PS417_10730	0.40	-0.4
2,293,784	+		PS417_10730	0.40	-0.4
2,293,785	-		PS417_10730	0.40	-0.5
2,293,939	+		PS417_10730	0.51	+1.1
2,293,987	-		PS417_10730	0.54	+0.1
2,294,011	+		PS417_10730	0.56	-1.8
2,294,068	+		PS417_10730	0.59	+0.0
2,294,068	+		PS417_10730	0.59	+0.3
2,294,068	+		PS417_10730	0.59	+0.4
2,294,068	+		PS417_10730	0.59	-0.4
2,294,069	-		PS417_10730	0.60	-1.2
2,294,069	-		PS417_10730	0.60	-0.6
2,294,069	-		PS417_10730	0.60	+0.4
2,294,069	-		PS417_10730	0.60	-0.2
2,294,071	-		PS417_10730	0.60	+2.9
2,294,092	-		PS417_10730	0.61	+0.2
2,294,117	-		PS417_10730	0.63	-1.1
2,294,117	-		PS417_10730	0.63	+0.1