Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00935 and PS417_00940 are separated by 13 nucleotides PS417_00940 and PS417_00945 are separated by 3 nucleotides PS417_00945 and PS417_00950 are separated by 70 nucleotides PS417_00950 and PS417_00955 are separated by 83 nucleotides
PS417_00935: PS417_00935 - sulfate ABC transporter permease, at 209,573 to 210,391
_00935
PS417_00940: PS417_00940 - sulfate ABC transporter permease, at 210,405 to 211,277
_00940
PS417_00945: PS417_00945 - sulfate ABC transporter ATP-binding protein, at 211,281 to 212,261
_00945
PS417_00950: PS417_00950 - membrane protein, at 212,332 to 212,856
_00950
PS417_00955: PS417_00955 - Crp/Fnr family transcriptional regulator, at 212,940 to 213,626
_00955
Position (kb) 211
212
213 Strain fitness (log2 ratio) -2
-1
0
1 at 210.287 kb on + strand, within PS417_00935 at 210.288 kb on - strand, within PS417_00935 at 210.288 kb on - strand, within PS417_00935 at 210.288 kb on - strand, within PS417_00935 at 210.477 kb on - strand at 210.696 kb on + strand, within PS417_00940 at 210.697 kb on - strand, within PS417_00940 at 210.777 kb on + strand, within PS417_00940 at 210.777 kb on + strand, within PS417_00940 at 211.152 kb on + strand, within PS417_00940 at 211.153 kb on - strand, within PS417_00940 at 211.153 kb on - strand, within PS417_00940 at 211.153 kb on - strand, within PS417_00940 at 211.242 kb on - strand at 211.242 kb on - strand at 211.275 kb on + strand at 211.275 kb on + strand at 211.275 kb on + strand at 211.276 kb on - strand at 211.276 kb on - strand at 211.713 kb on - strand, within PS417_00945 at 211.713 kb on - strand, within PS417_00945 at 211.980 kb on + strand, within PS417_00945 at 212.452 kb on + strand, within PS417_00950 at 212.502 kb on - strand, within PS417_00950 at 212.505 kb on - strand, within PS417_00950 at 212.860 kb on + strand at 212.871 kb on + strand at 212.871 kb on + strand at 212.872 kb on - strand at 212.872 kb on - strand at 213.014 kb on + strand, within PS417_00955 at 213.015 kb on - strand, within PS417_00955 at 213.015 kb on - strand, within PS417_00955 at 213.015 kb on - strand, within PS417_00955 at 213.015 kb on - strand, within PS417_00955 at 213.060 kb on + strand, within PS417_00955 at 213.061 kb on - strand, within PS417_00955 at 213.061 kb on - strand, within PS417_00955 at 213.061 kb on - strand, within PS417_00955 at 213.096 kb on + strand, within PS417_00955
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 210,287 + PS417_00935 0.87 -0.2 210,288 - PS417_00935 0.87 -0.4 210,288 - PS417_00935 0.87 +0.4 210,288 - PS417_00935 0.87 +0.8 210,477 - -0.9 210,696 + PS417_00940 0.33 -0.1 210,697 - PS417_00940 0.33 +1.5 210,777 + PS417_00940 0.43 -0.4 210,777 + PS417_00940 0.43 -1.7 211,152 + PS417_00940 0.86 -0.7 211,153 - PS417_00940 0.86 -0.8 211,153 - PS417_00940 0.86 +1.1 211,153 - PS417_00940 0.86 -0.1 211,242 - -0.1 211,242 - -0.3 211,275 + -0.2 211,275 + +0.5 211,275 + -2.7 211,276 - -0.1 211,276 - -2.2 211,713 - PS417_00945 0.44 -1.7 211,713 - PS417_00945 0.44 -0.3 211,980 + PS417_00945 0.71 -1.1 212,452 + PS417_00950 0.23 +0.2 212,502 - PS417_00950 0.32 -0.3 212,505 - PS417_00950 0.33 +0.4 212,860 + -0.2 212,871 + -0.3 212,871 + -1.7 212,872 - +1.3 212,872 - -0.3 213,014 + PS417_00955 0.11 +0.2 213,015 - PS417_00955 0.11 +0.1 213,015 - PS417_00955 0.11 +0.2 213,015 - PS417_00955 0.11 +0.2 213,015 - PS417_00955 0.11 +0.8 213,060 + PS417_00955 0.17 +0.3 213,061 - PS417_00955 0.18 -0.1 213,061 - PS417_00955 0.18 -2.1 213,061 - PS417_00955 0.18 +0.0 213,096 + PS417_00955 0.23 -0.2
Or see this region's nucleotide sequence