Strain Fitness in Pseudomonas simiae WCS417 around PS417_07695

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
1,694,885	+		PS417_07685	0.67	-0.6
1,694,886	-		PS417_07685	0.67	+0.1
1,694,979	+		PS417_07685	0.80	+1.1
1,695,069	+				-0.9
1,695,145	+				-0.2
1,695,145	+				+0.9
1,695,146	-				-0.2
1,695,148	-				+1.1
1,695,188	+				-0.4
1,695,188	+				-0.9
1,695,189	-				+0.3
1,695,189	-				+0.1
1,695,194	-				-0.9
1,695,226	-				-0.5
1,695,248	+				+1.1
1,695,248	+				+0.8
1,695,349	+		PS417_07690	0.16	-0.2
1,695,349	+		PS417_07690	0.16	-0.1
1,695,349	+		PS417_07690	0.16	-0.1
1,695,349	+		PS417_07690	0.16	+0.2
1,695,349	+		PS417_07690	0.16	+0.6
1,695,349	+				-1.7
1,695,350	-		PS417_07690	0.16	-0.1
1,695,390	+		PS417_07690	0.24	-0.0
1,695,654	-		PS417_07690	0.75	+0.9
1,695,670	-		PS417_07690	0.78	-0.2
1,695,742	+				-0.0
1,695,743	-				-0.9
1,695,834	+				-0.5
1,695,895	+				+0.1
1,695,895	+				-1.0
1,695,895	+				-1.0
1,695,895	+				-1.1
1,695,895	+				-0.8
1,695,896	-				-0.5
1,695,896	-				-1.5
1,695,896	-				-0.2
1,695,896	-				+1.1
1,695,896	-				-1.8
1,695,896	-				-0.4
1,695,907	+				-0.6
1,695,907	+				-1.1
1,695,908	-				-1.6
1,695,908	-				-0.5
1,695,908	-				+0.5
1,695,985	+		PS417_07695	0.16	-0.3
1,695,985	+		PS417_07695	0.16	-0.6
1,696,120	+		PS417_07695	0.32	-2.2
1,696,312	+		PS417_07695	0.56	-0.7
1,696,312	+		PS417_07695	0.56	-0.6
1,696,313	-		PS417_07695	0.56	-1.2
1,696,313	-		PS417_07695	0.56	-0.5
1,696,390	-		PS417_07695	0.65	-0.9
1,696,390	-		PS417_07695	0.65	-0.7
1,696,444	+		PS417_07695	0.71	-0.2
1,696,484	-				-0.5
1,696,484	-		PS417_07695	0.76	-0.8
1,696,585	+		PS417_07695	0.88	-1.3
1,696,595	-		PS417_07695	0.90	-0.6
1,696,679	-				-0.2
1,696,679	-				-0.0
1,696,679	-				-0.6
1,696,679	-				+2.6
1,696,682	+				+0.4
1,696,682	+				-0.4
1,696,683	-				-0.2
1,696,683	-				+2.7
1,696,683	-				-0.5
1,696,729	+				+1.1
1,696,849	+		PS417_07700	0.12	-0.1
1,696,925	-		PS417_07700	0.40	-0.3
1,696,961	+		PS417_07700	0.54	+1.1
1,697,099	-				+1.1
1,697,104	+				+1.5
1,697,116	+				-1.0
1,697,157	-				-0.7
1,697,157	-				-0.3
1,697,162	-				-0.0
1,697,162	-				-0.3
1,697,319	+		PS417_07705	0.21	+0.5
1,697,320	-		PS417_07705	0.21	-0.4