Strain Fitness in Agrobacterium fabrum C58 around Atu2799

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
2,799,810	+		Atu2798	0.28	-0.9
2,800,048	-		Atu2798	0.46	-1.2
2,800,224	+		Atu2798	0.60	-1.5
2,800,286	-		Atu2798	0.65	-1.1
2,800,424	+		Atu2798	0.76	-0.0
2,800,514	+		Atu2798	0.83	-0.8
2,800,527	-		Atu2798	0.84	+0.9
2,800,643	+				-1.3
2,800,693	-				-0.3
2,800,729	+				+0.2
2,800,736	-				-1.1
2,800,821	-		Atu2799	0.13	-0.1
2,800,847	-		Atu2799	0.16	-1.5
2,800,892	-		Atu2799	0.22	-0.5
2,800,948	-		Atu2799	0.29	+2.0
2,801,057	-		Atu2799	0.43	-1.0
2,801,078	-		Atu2799	0.46	-1.5
2,801,103	-		Atu2799	0.49	-0.3
2,801,230	+		Atu2799	0.65	+0.1
2,801,367	+		Atu2799	0.83	+0.7
2,801,445	+				+0.0
2,801,735	+		Atu2800	0.35	-0.8
2,801,931	-		Atu2800	0.60	-1.6
2,802,095	+		Atu2800	0.82	+0.1
2,802,235	-				+0.3