Strain Fitness in Agrobacterium fabrum C58 around Atu2127

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
2,092,295	+				+0.5
2,092,320	+				-0.1
2,092,442	+				-1.6
2,092,488	+		Atu2127	0.13	-1.4
2,092,598	-		Atu2127	0.23	+0.6
2,092,604	-		Atu2127	0.23	+0.0
2,092,637	-		Atu2127	0.26	-1.1
2,092,683	+		Atu2127	0.30	-0.8
2,092,693	+		Atu2127	0.31	-0.1
2,092,701	-		Atu2127	0.31	+0.6
2,092,756	-		Atu2127	0.36	+1.1
2,092,778	+		Atu2127	0.38	-1.1
2,092,778	+		Atu2127	0.38	-2.2
2,092,913	+		Atu2127	0.49	-2.1
2,092,938	+		Atu2127	0.51	-0.3
2,092,976	-		Atu2127	0.54	-0.4
2,093,036	+		Atu2127	0.59	-1.2
2,093,104	-		Atu2127	0.65	-1.2
2,093,296	+		Atu2127	0.81	-0.3
2,093,738	-		Atu2128	0.12	-1.2
2,093,781	-		Atu2128	0.15	+0.1
2,093,934	-		Atu2128	0.24	-0.0
2,094,037	+		Atu2128	0.30	-0.2
2,094,045	-		Atu2128	0.31	+0.5
2,094,058	+		Atu2128	0.32	+0.3
2,094,163	-		Atu2128	0.38	+0.1
2,094,268	+		Atu2128	0.44	+1.9
2,094,380	+		Atu2128	0.51	-1.0
2,094,400	+		Atu2128	0.52	+0.2
2,094,454	-		Atu2128	0.55	-0.8
2,094,491	-		Atu2128	0.58	-2.2