Strain Fitness in Agrobacterium fabrum C58 around Atu2082

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
2,039,957	+		Atu2081	0.13	+0.8
2,039,963	-		Atu2081	0.13	+0.2
2,040,088	+		Atu2081	0.27	+0.4
2,040,132	+		Atu2081	0.32	+1.7
2,040,167	+		Atu2081	0.36	+0.2
2,040,271	+		Atu2081	0.48	+0.1
2,040,271	+		Atu2081	0.48	-0.6
2,040,277	-		Atu2081	0.48	-0.3
2,040,336	+		Atu2081	0.55	-0.0
2,040,344	-		Atu2081	0.56	-0.4
2,040,488	-		Atu2081	0.72	+0.1
2,040,521	+		Atu2081	0.76	+0.1
2,040,529	-		Atu2081	0.77	-1.2
2,040,529	-		Atu2081	0.77	+0.1
2,040,650	-				-0.3
2,040,708	+				+1.2
2,040,742	-				-0.6
2,040,774	+				-0.2
2,040,774	+				+1.1
2,040,779	+				+0.9
2,040,782	-				+1.2
2,043,098	+				+0.3
2,043,144	-				-1.8
2,043,331	+		Atu2083	0.14	-2.5
2,043,490	+		Atu2083	0.23	-4.9
2,043,957	-		Atu2083	0.51	-2.1