Strain Fitness in Agrobacterium fabrum C58 around Atu0086

Experiment: R2A with Nitrofurantoin 0.4 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nitrofurantoin 0.4 mg/mL
87,339	-				-1.0
87,365	+				-0.5
87,382	+				+2.6
87,437	-		Atu0085	0.14	-0.8
87,442	-		Atu0085	0.14	+0.1
87,452	-		Atu0085	0.15	-0.7
87,465	-		Atu0085	0.17	+1.8
87,609	-		Atu0085	0.32	+0.3
87,751	+		Atu0085	0.47	+0.1
87,832	-		Atu0085	0.55	+0.1
87,862	-		Atu0085	0.59	-0.1
88,213	+				+0.1
88,221	-				-0.6
88,221	-				+0.2
88,221	-				+1.5
88,221	-				+0.4
88,456	+		Atu0086	0.47	-0.8
88,625	-		Atu0086	0.88	-0.8
88,768	-				+0.4