Strain Fitness in Escherichia coli BW25113 around b2186
Experiment: capsaicin 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | capsaicin 1 mM |
---|---|---|---|---|---|
remove | |||||
2,279,967 | - | yejH | b2184 | 0.75 | +0.5 |
2,280,065 | + | yejH | b2184 | 0.80 | +0.9 |
2,280,078 | - | yejH | b2184 | 0.81 | -0.2 |
2,280,078 | - | yejH | b2184 | 0.81 | +0.2 |
2,280,080 | + | yejH | b2184 | 0.81 | +0.0 |
2,280,148 | + | yejH | b2184 | 0.85 | -0.2 |
2,280,161 | + | yejH | b2184 | 0.86 | +0.1 |
2,280,214 | - | yejH | b2184 | 0.89 | -0.0 |
2,280,240 | + | +0.1 | |||
2,280,266 | - | -0.3 | |||
2,280,943 | + | -0.2 | |||
2,281,099 | - | yejK | b2186 | 0.14 | +0.1 |
2,281,099 | - | yejK | b2186 | 0.14 | -0.1 |
2,281,135 | + | yejK | b2186 | 0.17 | -0.1 |
2,281,166 | - | yejK | b2186 | 0.20 | +0.3 |
2,281,166 | - | yejK | b2186 | 0.20 | +0.6 |
2,281,253 | + | yejK | b2186 | 0.29 | -0.4 |
2,281,255 | + | yejK | b2186 | 0.29 | -0.1 |
2,281,263 | + | yejK | b2186 | 0.30 | +0.5 |
2,281,263 | + | yejK | b2186 | 0.30 | +0.5 |
2,281,284 | - | yejK | b2186 | 0.32 | +0.2 |
2,281,284 | - | yejK | b2186 | 0.32 | +0.4 |
2,281,286 | + | yejK | b2186 | 0.32 | -0.1 |
2,281,294 | - | yejK | b2186 | 0.33 | +0.2 |
2,281,323 | - | yejK | b2186 | 0.36 | +0.1 |
2,281,325 | + | yejK | b2186 | 0.36 | +0.6 |
2,281,347 | + | yejK | b2186 | 0.38 | +0.1 |
2,281,377 | - | yejK | b2186 | 0.41 | +1.0 |
2,281,447 | + | yejK | b2186 | 0.48 | +0.4 |
2,281,456 | - | yejK | b2186 | 0.49 | -0.1 |
2,281,483 | + | yejK | b2186 | 0.52 | +0.2 |
2,281,512 | - | yejK | b2186 | 0.55 | +0.6 |
2,281,512 | - | yejK | b2186 | 0.55 | +0.2 |
2,281,780 | - | yejK | b2186 | 0.81 | +0.4 |
2,281,887 | + | +0.8 | |||
2,281,905 | - | -0.4 | |||
2,282,004 | - | +0.0 | |||
2,282,026 | + | +0.3 | |||
2,282,026 | + | +0.2 | |||
2,282,256 | + | yejL | b2187 | 0.46 | +0.0 |
2,282,304 | + | yejL | b2187 | 0.67 | -0.5 |
Or see this region's nucleotide sequence