Strain Fitness in Escherichia coli BW25113 around b2014

Experiment: capsaicin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 1 mM
2,082,775	-	yeeE	b2013	0.27	+0.2
2,082,775	-	yeeE	b2013	0.27	+0.5
2,082,851	-	yeeE	b2013	0.34	+0.3
2,082,881	+	yeeE	b2013	0.37	-0.0
2,082,897	-	yeeE	b2013	0.38	+1.1
2,082,897	-	yeeE	b2013	0.38	+0.2
2,082,915	-	yeeE	b2013	0.40	+0.4
2,082,973	+	yeeE	b2013	0.46	+0.3
2,082,973	+	yeeE	b2013	0.46	+0.3
2,082,981	-	yeeE	b2013	0.46	-0.1
2,083,040	-	yeeE	b2013	0.52	+0.7
2,083,040	-	yeeE	b2013	0.52	+0.5
2,083,126	+	yeeE	b2013	0.60	+0.3
2,083,139	+	yeeE	b2013	0.61	+0.2
2,083,183	+	yeeE	b2013	0.65	-0.2
2,083,186	-	yeeE	b2013	0.66	-0.5
2,083,186	-	yeeE	b2013	0.66	-0.7
2,083,258	-	yeeE	b2013	0.72	-0.7
2,083,310	+	yeeE	b2013	0.77	+0.2
2,083,319	-	yeeE	b2013	0.78	+0.2
2,083,319	-	yeeE	b2013	0.78	+0.1
2,083,462	+				-0.1
2,083,470	+				+0.3
2,083,498	-				+0.5
2,083,498	-				+1.5
2,083,498	-				+0.3
2,083,537	-				+1.9
2,083,693	-				+0.8
2,083,807	+				+0.4
2,083,877	-	yeeF	b2014	0.11	+0.6
2,083,887	-	yeeF	b2014	0.12	+0.5
2,083,939	+	yeeF	b2014	0.16	-1.1
2,083,957	+	yeeF	b2014	0.17	-0.2
2,083,996	+	yeeF	b2014	0.20	-0.1
2,084,160	+	yeeF	b2014	0.32	+0.2
2,084,160	+	yeeF	b2014	0.32	-0.4
2,084,200	-	yeeF	b2014	0.35	+0.7
2,084,206	-	yeeF	b2014	0.35	-0.4
2,084,260	+	yeeF	b2014	0.39	+0.7
2,084,276	+	yeeF	b2014	0.40	-0.1
2,084,284	+	yeeF	b2014	0.41	+1.1
2,084,284	+	yeeF	b2014	0.41	+0.6
2,084,421	+	yeeF	b2014	0.51	+0.3
2,084,421	+	yeeF	b2014	0.51	-0.7
2,084,450	-	yeeF	b2014	0.53	+0.5
2,084,462	-	yeeF	b2014	0.54	-0.2
2,084,569	-	yeeF	b2014	0.62	-0.0
2,084,606	-	yeeF	b2014	0.65	+0.1
2,084,606	-	yeeF	b2014	0.65	-0.1
2,084,651	+	yeeF	b2014	0.68	+0.6
2,084,651	+	yeeF	b2014	0.68	+0.1
2,084,741	+	yeeF	b2014	0.75	+1.6
2,084,790	+	yeeF	b2014	0.78	-0.5
2,084,790	+	yeeF	b2014	0.78	-0.1
2,084,803	-	yeeF	b2014	0.79	+1.6
2,084,945	-	yeeF	b2014	0.90	+1.7
2,084,945	-	yeeF	b2014	0.90	-0.1
2,085,023	+				+0.5
2,085,023	+				-0.4
2,085,092	+	yoeI	b4678	0.25	+0.6
2,085,736	+	yeeY	b2015	0.41	-0.4
2,085,786	+	yeeY	b2015	0.47	-1.4
2,085,813	+	yeeY	b2015	0.49	+0.2
2,085,852	-	yeeY	b2015	0.54	+0.8
2,085,860	+	yeeY	b2015	0.55	-0.7
2,085,860	+	yeeY	b2015	0.55	-0.0
2,085,866	+	yeeY	b2015	0.55	+0.0
2,086,064	-	yeeY	b2015	0.76	-0.2