Experiment: Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00070 and PS417_00075 are separated by 136 nucleotides PS417_00075 and PS417_00080 are separated by 17 nucleotides
PS417_00070: PS417_00070 - lipid A biosynthesis lauroyl acyltransferase, at 15,974 to 16,861
_00070
PS417_00075: PS417_00075 - hypothetical protein, at 16,998 to 17,309
_00075
PS417_00080: PS417_00080 - potassium transporter peripheral membrane component, at 17,327 to 18,700
_00080
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 16.856 kb on + strand at 16.924 kb on + strand at 16.924 kb on + strand at 16.925 kb on - strand at 17.079 kb on + strand, within PS417_00075 at 17.080 kb on - strand, within PS417_00075 at 17.165 kb on - strand, within PS417_00075 at 17.165 kb on - strand, within PS417_00075 at 17.268 kb on - strand, within PS417_00075 at 17.701 kb on - strand, within PS417_00080 at 17.701 kb on - strand, within PS417_00080 at 17.767 kb on + strand, within PS417_00080 at 17.767 kb on + strand, within PS417_00080 at 17.768 kb on - strand, within PS417_00080 at 17.768 kb on - strand, within PS417_00080 at 17.768 kb on - strand, within PS417_00080 at 17.768 kb on - strand, within PS417_00080 at 17.768 kb on - strand, within PS417_00080 at 18.007 kb on + strand, within PS417_00080 at 18.009 kb on + strand, within PS417_00080 at 18.009 kb on + strand, within PS417_00080 at 18.010 kb on - strand, within PS417_00080 at 18.010 kb on - strand, within PS417_00080 at 18.222 kb on + strand, within PS417_00080 at 18.309 kb on + strand, within PS417_00080 at 18.309 kb on + strand, within PS417_00080
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.002 mg/ml remove 16,856 + +0.9 16,924 + +0.1 16,924 + -0.4 16,925 - -0.9 17,079 + PS417_00075 0.26 -1.9 17,080 - PS417_00075 0.26 -1.0 17,165 - PS417_00075 0.54 -0.7 17,165 - PS417_00075 0.54 -0.3 17,268 - PS417_00075 0.87 -0.7 17,701 - PS417_00080 0.27 -0.3 17,701 - PS417_00080 0.27 -0.1 17,767 + PS417_00080 0.32 -1.0 17,767 + PS417_00080 0.32 -1.8 17,768 - PS417_00080 0.32 -1.3 17,768 - PS417_00080 0.32 -0.5 17,768 - PS417_00080 0.32 +1.3 17,768 - PS417_00080 0.32 -0.6 17,768 - PS417_00080 0.32 -0.6 18,007 + PS417_00080 0.49 -0.8 18,009 + PS417_00080 0.50 -1.4 18,009 + PS417_00080 0.50 +0.3 18,010 - PS417_00080 0.50 +2.1 18,010 - PS417_00080 0.50 -0.8 18,222 + PS417_00080 0.65 -0.1 18,309 + PS417_00080 0.71 -1.1 18,309 + PS417_00080 0.71 -2.1
Or see this region's nucleotide sequence