Strain Fitness in Escherichia coli BW25113 around b1317

Experiment: capsaicin 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 1 mM
1,377,174	-	ycjT	b1316	0.56	-0.1
1,377,634	+	ycjT	b1316	0.76	+0.1
1,377,666	-	ycjT	b1316	0.78	+0.5
1,377,676	-	ycjT	b1316	0.78	-0.2
1,377,844	+	ycjT	b1316	0.85	-0.4
1,377,850	-	ycjT	b1316	0.86	+0.2
1,377,854	+	ycjT	b1316	0.86	-0.7
1,377,967	+				+0.4
1,378,082	+				-0.0
1,378,082	+				-0.1
1,378,093	+				-0.2
1,378,093	+				+0.2
1,378,273	-	ycjU	b1317	0.15	-0.3
1,378,326	-	ycjU	b1317	0.23	+0.6
1,378,659	-	ycjU	b1317	0.74	+0.1
1,378,707	+	ycjU	b1317	0.81	-0.8
1,378,711	-	ycjU	b1317	0.82	-0.2
1,378,887	+				+0.3
1,379,330	+	ycjV	b4524	0.45	+0.2
1,379,332	+	ycjV	b4524	0.45	-0.6
1,379,332	+	ycjV	b4524	0.45	-0.1
1,379,380	-	ycjV	b4524	0.49	+0.3
1,379,416	-	ycjV	b4524	0.53	+0.8
1,379,443	+	ycjV	b4524	0.55	-1.1
1,379,443	+	ycjV	b4524	0.55	-0.1
1,379,481	+	ycjV	b4524	0.59	-0.0
1,379,488	+	ycjV	b4524	0.59	+0.1
1,379,498	+	ycjV	b4524	0.60	+0.2
1,379,546	+	ycjV	b4524	0.65	+0.5
1,379,612	+	ycjV	b4524	0.71	-1.1
1,379,612	+	ycjV	b4524	0.71	+0.8
1,379,665	+	ycjV	b4524	0.76	-0.1
1,379,675	+	ycjV	b4524	0.77	+0.2
1,379,675	+	ycjV	b4524	0.77	+0.6
1,379,710	+	ycjV	b4524	0.80	-0.8
1,379,760	+	ycjV	b4524	0.85	+0.2
1,379,760	+	ycjV	b4524	0.85	+0.8
1,379,769	+	ycjV	b4524	0.85	-0.8
1,379,769	+	ycjV	b4524	0.85	-0.6
1,379,770	+	ycjV	b4524	0.85	+0.5
1,379,786	+	ycjV	b4524	0.87	+0.5
1,379,791	+	ycjV	b4524	0.87	+0.2
1,379,793	+	ycjV	b4524	0.88	-0.3
1,379,799	-	ycjV	b4524	0.88	+0.4
1,379,803	-	ycjV	b4524	0.89	-0.2
1,379,808	+	ycjV	b4524	0.89	-0.0
1,379,808	+	ycjV	b4524	0.89	+1.2
1,379,820	+				-0.3
1,379,820	+				+0.0
1,379,820	+				+0.6