Strain Fitness in Agrobacterium fabrum C58 around Atu8056

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
674,970	-		Atu0680	0.57	+1.2
674,975	-		Atu0680	0.58	-0.6
675,182	-				-0.4
675,185	+				+0.2
675,456	+		Atu0681	0.38	-0.2
675,464	-		Atu0681	0.40	+0.4
675,493	+		Atu0681	0.47	-0.1
675,502	+		Atu0681	0.49	+0.1
675,522	-		Atu0681	0.53	-0.3
675,527	-		Atu0681	0.54	+0.1
675,649	+		Atu0681	0.83	+0.4
675,659	+		Atu0681	0.85	-0.1
675,720	+				+0.0
675,730	-				-1.2
675,735	-				+0.4
675,817	-				-0.2
676,123	+		Atu8056	0.57	-1.1
676,321	+				+1.1