Strain Fitness in Agrobacterium fabrum C58 around Atu3710

Experiment: R2A with Ceftazidime 4 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAtu3709 and Atu3710 are separated by 188 nucleotidesAtu3710 and Atu3711 are separated by 154 nucleotides Atu3709: Atu3709 - phosphoglucosamine mutase, at 789,459 to 790,811 Atu3709 Atu3710: Atu3710 - metalloprotease, at 791,000 to 792,946 Atu3710 Atu3711: Atu3711 - hypothetical protein, at 793,101 to 794,432 Atu3711 Position (kb) 790 791 792 793Strain fitness (log2 ratio) -1 0 1at 791.156 kb on - strandat 793.120 kb on - strandat 793.125 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with Ceftazidime 4 mM
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791,156 - -0.6
793,120 - +0.3
793,125 - -0.1

Or see this region's nucleotide sequence