Strain Fitness in Agrobacterium fabrum C58 around Atu1646

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
1,628,771	+		Atu1645	0.35	-2.1
1,628,771	+		Atu1645	0.35	-3.7
1,628,771	+		Atu1645	0.35	-0.9
1,628,774	-		Atu1645	0.35	-2.2
1,628,774	-		Atu1645	0.35	-2.4
1,628,779	-		Atu1645	0.35	-2.1
1,628,805	-		Atu1645	0.37	-3.9
1,628,836	-		Atu1645	0.39	-2.1
1,628,869	+		Atu1645	0.42	-0.5
1,628,869	+		Atu1645	0.42	-2.5
1,628,869	+		Atu1645	0.42	-0.9
1,628,898	-		Atu1645	0.44	-0.7
1,629,033	+		Atu1645	0.54	-1.3
1,629,040	-		Atu1645	0.54	-1.9
1,629,147	+		Atu1645	0.62	-2.0
1,629,289	+		Atu1645	0.72	+0.3
1,629,297	-		Atu1645	0.73	-3.7
1,629,297	-		Atu1645	0.73	-1.1
1,629,403	+		Atu1645	0.81	+0.5
1,629,529	+		Atu1645	0.90	-1.6
1,629,543	+				-1.9
1,629,758	+				-2.9
1,629,884	+		Atu1646	0.25	-2.7
1,629,941	+		Atu1646	0.32	-3.0
1,630,015	+		Atu1646	0.41	-4.0
1,630,023	-		Atu1646	0.42	-1.5
1,630,127	+		Atu1646	0.54	-2.8
1,630,185	-		Atu1646	0.61	-3.3
1,630,195	+		Atu1646	0.62	-1.1
1,630,203	-		Atu1646	0.63	-4.1
1,630,229	-		Atu1646	0.66	-1.6
1,630,330	+		Atu1646	0.78	+0.2
1,630,649	-		Atu1647	0.11	+1.1
1,630,657	-		Atu1647	0.12	-2.1
1,630,657	-		Atu1647	0.12	-1.7
1,630,675	+		Atu1647	0.13	-2.5
1,630,683	-		Atu1647	0.14	-3.6
1,631,187	+		Atu1647	0.57	-2.4
1,631,218	-		Atu1647	0.60	-2.5
1,631,218	-		Atu1647	0.60	-2.3
1,631,283	-		Atu1647	0.66	-1.9
1,631,283	-		Atu1647	0.66	-3.5
1,631,339	+		Atu1647	0.70	-3.4
1,631,437	+		Atu1647	0.79	-0.9