Strain Fitness in Agrobacterium fabrum C58 around Atu1175

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
1,168,528	-		Atu1174	0.59	+0.4
1,168,533	-		Atu1174	0.59	+0.8
1,168,670	+		Atu1174	0.66	-0.4
1,168,676	+		Atu1174	0.66	+0.1
1,168,708	+		Atu1174	0.68	-0.1
1,168,811	+		Atu1174	0.72	-0.2
1,168,849	+		Atu1174	0.74	-0.8
1,168,855	+		Atu1174	0.74	+0.2
1,168,865	-		Atu1174	0.75	-0.3
1,168,953	+		Atu1174	0.79	+0.2
1,169,028	-		Atu1174	0.82	+0.9
1,169,131	-		Atu1174	0.87	+1.9
1,169,206	-				-0.0
1,169,245	+				-0.9
1,169,252	-				+1.4
1,169,411	-				-0.7
1,169,412	-				+2.5
1,169,546	-		Atu1175	0.13	-1.2
1,170,118	-				-0.7
1,170,406	+		Atu1176	0.23	+0.6
1,170,559	+		Atu1176	0.51	+0.3
1,170,645	+		Atu1176	0.67	-0.5
1,170,663	-		Atu1176	0.71	-0.7
1,170,680	+		Atu1176	0.74	+0.1
1,170,680	+		Atu1176	0.74	+1.2
1,170,767	+				-1.1
1,170,768	+				-0.3
1,170,776	-				+0.6
1,170,812	-				+1.2
1,170,824	-				+1.9