Strain Fitness in Agrobacterium fabrum C58 around Atu1165

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
1,159,123	+		Atu1164	0.53	+0.9
1,159,153	-		Atu1164	0.55	+0.5
1,159,339	-		Atu1164	0.69	+1.2
1,159,340	+		Atu1164	0.69	+0.5
1,159,360	-		Atu1164	0.70	+1.2
1,159,438	+		Atu1164	0.76	+1.4
1,159,464	+		Atu1164	0.78	+1.0
1,159,499	+		Atu1164	0.81	+1.1
1,159,499	+		Atu1164	0.81	+2.0
1,159,578	-		Atu1164	0.87	+1.1
1,159,620	+		Atu1164	0.90	+1.2
1,159,682	+				+1.5
1,159,688	+				-0.2
1,159,793	+				-0.1
1,159,806	-				+0.5
1,159,837	+				+0.5
1,159,837	-				-0.6
1,159,898	+				+0.6
1,159,911	-				+0.3
1,159,912	-				-0.5
1,159,929	-				+0.4