Strain Fitness in Agrobacterium fabrum C58 around Atu0994

Experiment: R2A with Ceftazidime 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Ceftazidime 4 mM
988,742	+		Atu0993	0.15	+0.6
988,947	-		Atu0993	0.48	+0.7
988,976	+		Atu0993	0.52	+0.2
988,976	+		Atu0993	0.52	+0.5
988,984	-		Atu0993	0.53	+0.1
988,989	-		Atu0993	0.54	+1.1
989,117	-		Atu0993	0.75	+0.6
989,145	-		Atu0993	0.79	+0.7
989,161	+		Atu0993	0.82	+0.1
989,264	-				-2.9
989,303	-				-0.3
989,384	-				-0.6
989,489	-				-1.1
989,511	+				+0.5
989,592	-				+0.1
991,299	+				-0.6
991,324	-				-1.2
991,392	-				+0.3
991,445	-				+0.4
991,492	+				+0.0
991,547	+				+0.2
991,617	-				+0.7
991,675	+				-0.3
991,778	+				+0.9
991,786	-				+1.6
991,786	-				-0.6
991,943	+		Atu0995	0.28	+1.1
991,956	+		Atu0995	0.29	+1.5
991,974	-		Atu0995	0.32	+2.6
992,012	+		Atu0995	0.37	+1.4
992,019	-		Atu0995	0.38	-0.2
992,049	-		Atu0995	0.42	+1.3
992,072	+		Atu0995	0.45	+1.8
992,080	-		Atu0995	0.46	+0.4
992,111	-		Atu0995	0.50	+1.4
992,170	-		Atu0995	0.58	+1.3
992,176	+		Atu0995	0.59	+0.8
992,193	+		Atu0995	0.61	+1.3
992,221	-		Atu0995	0.65	+1.3