Strain Fitness in Escherichia coli BW25113 around b1225

Experiment: capsaicin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 2 mM
1,281,833	+	narG	b1224	0.73	+0.7
1,281,833	+	narG	b1224	0.73	-0.0
1,281,870	+	narG	b1224	0.74	+1.0
1,281,881	+	narG	b1224	0.75	+1.0
1,281,881	+	narG	b1224	0.75	-0.0
1,282,127	-	narG	b1224	0.81	-0.6
1,282,221	+	narG	b1224	0.84	-0.5
1,282,221	+	narG	b1224	0.84	+0.6
1,282,634	-				+0.1
1,282,810	+				-0.7
1,282,810	+				+0.6
1,282,856	+				+0.4
1,282,954	-				+0.1
1,282,954	-				-0.1
1,283,081	+	narH	b1225	0.17	-0.0
1,283,279	+	narH	b1225	0.29	-0.5
1,283,638	+	narH	b1225	0.53	-0.3
1,283,650	-	narH	b1225	0.53	-0.7
1,283,650	-	narH	b1225	0.53	-0.0
1,283,882	+	narH	b1225	0.69	+0.7
1,283,882	+	narH	b1225	0.69	+0.0
1,283,939	+	narH	b1225	0.72	+1.1
1,283,947	-	narH	b1225	0.73	+0.5
1,283,947	-	narH	b1225	0.73	+0.3
1,284,099	+	narH	b1225	0.83	+0.5
1,284,152	+	narH	b1225	0.86	-0.1
1,284,436	+	narJ	b1226	0.10	-0.0
1,284,436	+	narJ	b1226	0.10	-0.1
1,284,480	+	narJ	b1226	0.17	-1.4
1,284,554	-	narJ	b1226	0.27	+0.2
1,284,634	+	narJ	b1226	0.38	+0.1
1,284,728	-	narJ	b1226	0.51	-0.1
1,284,809	+	narJ	b1226	0.63	-0.5
1,284,809	+	narJ	b1226	0.63	+0.1
1,285,100	+				-0.2
1,285,167	+	narI	b1227	0.14	+0.5
1,285,352	-	narI	b1227	0.41	+0.5
1,285,352	-	narI	b1227	0.41	-0.3