Experiment: LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2597 and GFF2598 are separated by 155 nucleotides GFF2598 and GFF2599 overlap by 14 nucleotides GFF2599 and GFF2600 are separated by 106 nucleotides
GFF2597 - Uncharacterized membrane lipoprotein clustered with tellurite resistance proteins TehA/TehB, at 123,156 to 123,824
GFF2597
GFF2598 - Tellurite resistance protein TehB, at 123,980 to 124,576
GFF2598
GFF2599 - Tellurite resistance protein TehA, at 124,563 to 125,576
GFF2599
GFF2600 - FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB, at 125,683 to 126,663
GFF2600
Position (kb) 124
125
126 Strain fitness (log2 ratio) -1
0
1 at 123.632 kb on - strand, within GFF2597 at 123.737 kb on + strand, within GFF2597 at 123.803 kb on + strand at 123.818 kb on + strand at 124.006 kb on + strand at 124.074 kb on + strand, within GFF2598 at 124.098 kb on + strand, within GFF2598 at 124.166 kb on - strand, within GFF2598 at 124.343 kb on - strand, within GFF2598 at 124.385 kb on - strand, within GFF2598 at 124.445 kb on - strand, within GFF2598 at 124.466 kb on + strand, within GFF2598 at 124.653 kb on - strand at 124.818 kb on + strand, within GFF2599 at 124.857 kb on + strand, within GFF2599 at 124.970 kb on + strand, within GFF2599 at 125.141 kb on - strand, within GFF2599 at 125.221 kb on - strand, within GFF2599 at 125.415 kb on - strand, within GFF2599 at 125.458 kb on - strand, within GFF2599 at 125.655 kb on - strand at 125.722 kb on - strand at 125.722 kb on - strand at 125.757 kb on - strand at 125.946 kb on + strand, within GFF2600 at 126.188 kb on + strand, within GFF2600 at 126.371 kb on - strand, within GFF2600 at 126.512 kb on + strand, within GFF2600 at 126.513 kb on - strand, within GFF2600 at 126.570 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI remove 123,632 - GFF2597 0.71 +0.8 123,737 + GFF2597 0.87 +0.7 123,803 + -0.7 123,818 + +0.1 124,006 + +0.5 124,074 + GFF2598 0.16 -0.6 124,098 + GFF2598 0.20 -1.0 124,166 - GFF2598 0.31 -0.2 124,343 - GFF2598 0.61 +0.4 124,385 - GFF2598 0.68 -1.0 124,445 - GFF2598 0.78 +0.4 124,466 + GFF2598 0.81 -1.0 124,653 - -0.9 124,818 + GFF2599 0.25 +0.4 124,857 + GFF2599 0.29 -0.1 124,970 + GFF2599 0.40 -0.5 125,141 - GFF2599 0.57 -0.2 125,221 - GFF2599 0.65 -0.1 125,415 - GFF2599 0.84 +0.3 125,458 - GFF2599 0.88 -0.7 125,655 - +0.1 125,722 - -0.7 125,722 - -0.1 125,757 - +0.4 125,946 + GFF2600 0.27 -0.1 126,188 + GFF2600 0.51 -1.2 126,371 - GFF2600 0.70 +0.0 126,512 + GFF2600 0.85 +0.1 126,513 - GFF2600 0.85 +0.0 126,570 - +0.5
Or see this region's nucleotide sequence