Strain Fitness in Escherichia coli BW25113 around b2359

Experiment: capsaicin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 2 mM
2,470,741	-	yfdN	b2357	0.67	+0.7
2,470,913	-				-1.5
2,470,928	+				+0.3
2,471,021	-	oweS	b2358	0.17	-0.4
2,471,021	-	oweS	b2358	0.17	-0.8
2,471,090	+	oweS	b2358	0.27	-0.3
2,471,133	+	oweS	b2358	0.33	-0.4
2,471,133	+	oweS	b2358	0.33	+0.5
2,471,201	+	oweS	b2358	0.43	+0.5
2,471,201	+	oweS	b2358	0.43	+0.3
2,471,263	+	oweS	b2358	0.51	+0.4
2,471,277	-	oweS	b2358	0.53	-0.4
2,471,277	-	oweS	b2358	0.53	+0.2
2,471,372	+	oweS	b2358	0.67	+0.3
2,471,372	+	oweS	b2358	0.67	+0.3
2,471,526	+	oweS	b2358	0.88	-0.6
2,471,539	-				-0.9
2,471,605	+				+0.4
2,471,605	+				+0.1
2,471,765	-	yfdP	b2359	0.38	-0.2
2,471,783	+	yfdP	b2359	0.43	-1.5
2,471,835	+	yfdP	b2359	0.58	-0.0
2,471,841	-	yfdP	b2359	0.59	+0.2
2,471,906	+	yfdP	b2359	0.77	-0.9
2,471,906	+	yfdP	b2359	0.77	-0.2
2,471,909	+	yfdP	b2359	0.78	-1.7
2,471,909	+	yfdP	b2359	0.78	-0.7
2,471,913	+	yfdP	b2359	0.79	-0.6
2,471,936	+	yfdP	b2359	0.85	+0.0
2,471,936	+	yfdP	b2359	0.85	-0.7
2,471,945	+	yfdP	b2359	0.88	-0.5
2,471,945	+	yfdP	b2359	0.88	-0.2
2,471,970	+				-0.7
2,471,970	+				-1.9
2,472,031	+				+0.2
2,472,074	+				+0.3
2,472,223	-	yfdQ	b2360	0.20	+0.4
2,472,227	+	yfdQ	b2360	0.21	+0.1
2,472,228	-	yfdQ	b2360	0.21	-0.1
2,472,235	+	yfdQ	b2360	0.22	-0.1
2,472,235	-	yfdQ	b2360	0.22	-0.1
2,472,235	-	yfdQ	b2360	0.22	-0.3
2,472,258	-	yfdQ	b2360	0.25	-0.2
2,472,272	-	yfdQ	b2360	0.26	-0.0
2,472,287	-	yfdQ	b2360	0.28	+0.7
2,472,287	-	yfdQ	b2360	0.28	+0.5
2,472,297	-	yfdQ	b2360	0.29	-0.0
2,472,309	+	yfdQ	b2360	0.31	+0.9
2,472,309	+	yfdQ	b2360	0.31	+0.1
2,472,317	-	yfdQ	b2360	0.32	+0.3
2,472,317	-	yfdQ	b2360	0.32	-0.0
2,472,336	+	yfdQ	b2360	0.34	+1.1
2,472,337	+	yfdQ	b2360	0.34	+0.8
2,472,337	+	yfdQ	b2360	0.34	+0.6
2,472,339	-	yfdQ	b2360	0.35	-0.6
2,472,340	-	yfdQ	b2360	0.35	+0.1
2,472,343	-	yfdQ	b2360	0.35	-0.0
2,472,346	+	yfdQ	b2360	0.35	+0.4
2,472,346	-	yfdQ	b2360	0.35	+0.4
2,472,353	-	yfdQ	b2360	0.36	+0.8
2,472,362	-	yfdQ	b2360	0.37	-0.3
2,472,363	-	yfdQ	b2360	0.37	+0.3
2,472,367	-	yfdQ	b2360	0.38	+0.7
2,472,367	-	yfdQ	b2360	0.38	-0.2
2,472,404	+	yfdQ	b2360	0.42	-0.7
2,472,410	-	yfdQ	b2360	0.43	+0.1
2,472,410	-	yfdQ	b2360	0.43	+1.1
2,472,417	-	yfdQ	b2360	0.44	-0.5
2,472,417	-	yfdQ	b2360	0.44	+0.4
2,472,451	-	yfdQ	b2360	0.48	+0.8
2,472,490	-	yfdQ	b2360	0.53	-0.4
2,472,492	-	yfdQ	b2360	0.53	-0.7
2,472,511	-	yfdQ	b2360	0.55	+0.2
2,472,577	-	yfdQ	b2360	0.63	+0.8
2,472,577	-	yfdQ	b2360	0.63	+0.2
2,472,578	-	yfdQ	b2360	0.64	-0.1
2,472,591	-	yfdQ	b2360	0.65	-0.7
2,472,618	+	yfdQ	b2360	0.68	+1.5
2,472,618	+	yfdQ	b2360	0.68	-1.4
2,472,626	-	yfdQ	b2360	0.69	-0.3
2,472,626	-	yfdQ	b2360	0.69	+0.8
2,472,630	+	yfdQ	b2360	0.70	+0.9
2,472,679	-	yfdQ	b2360	0.76	-0.1
2,472,684	+	yfdQ	b2360	0.76	+1.0
2,472,684	+	yfdQ	b2360	0.76	+0.6
2,472,686	+	yfdQ	b2360	0.77	-0.2
2,472,686	+	yfdQ	b2360	0.77	+0.3
2,472,704	-	yfdQ	b2360	0.79	-0.3
2,472,731	+	yfdQ	b2360	0.82	+0.3
2,472,745	+	yfdQ	b2360	0.84	+0.2
2,472,745	+	yfdQ	b2360	0.84	-0.6
2,472,745	+	yfdQ	b2360	0.84	-1.2
2,472,745	+	yfdQ	b2360	0.84	+0.2
2,472,745	+	yfdQ	b2360	0.84	-0.8
2,472,745	+	yfdQ	b2360	0.84	+0.8
2,472,745	+	yfdQ	b2360	0.84	-0.3
2,472,745	+	yfdQ	b2360	0.84	+0.3
2,472,746	+	yfdQ	b2360	0.84	-0.1
2,472,750	+	yfdQ	b2360	0.84	+0.0
2,472,759	-	yfdQ	b2360	0.85	-0.2
2,472,763	+	yfdQ	b2360	0.86	-0.1
2,472,763	+	yfdQ	b2360	0.86	+1.3
2,472,768	+	yfdQ	b2360	0.87	-0.1
2,472,773	+	yfdQ	b2360	0.87	+0.3
2,472,783	+	yfdQ	b2360	0.88	+0.5
2,472,783	+	yfdQ	b2360	0.88	-1.0
2,472,896	+				+0.7
2,472,896	+				-0.3
2,472,906	-				-0.1
2,472,943	+				+1.5
2,472,943	+				+0.0
2,472,946	+				-1.3
2,472,946	+				+0.1
2,472,951	+				+1.0
2,472,951	+				-0.7
2,472,952	-				+0.5
2,472,954	-				-0.2
2,472,954	-				+0.8
2,472,958	+				+0.2
2,472,958	+				-0.2
2,472,958	+				+0.3
2,472,962	+				+0.1
2,472,974	+				+0.1
2,472,974	+				+0.4
2,472,977	-				+0.7
2,472,979	+				+0.7
2,472,979	+				-0.3
2,472,979	+				+0.5
2,472,979	+				+0.2
2,472,979	+				-0.2
2,472,979	+				+0.7
2,472,984	+				+0.5
2,472,984	+				+1.0
2,472,985	+				+0.8
2,472,986	+				+0.1
2,472,987	+				-0.5
2,472,987	+				+1.1
2,472,987	+				+1.4