Strain Fitness in Escherichia coli BW25113 around b1861

Experiment: capsaicin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 2 mM
1,942,423	+				-1.6
1,942,445	-				-0.3
1,942,446	-				-0.4
1,942,806	+	ruvB	b1860	0.43	+1.1
1,942,985	+	ruvB	b1860	0.61	-0.3
1,943,892	+	ruvA	b1861	0.82	-0.7
1,943,919	-	ruvA	b1861	0.87	-1.5
1,943,934	-	ruvA	b1861	0.89	+0.5
1,943,990	-				-1.7
1,943,996	+				-0.7
1,943,996	+				-0.3
1,944,021	+				+0.2
1,944,102	+				+1.2
1,944,102	+				-1.3
1,944,137	+				-0.5
1,944,333	-				+0.1
1,944,333	-				+0.5
1,944,511	-	yebB	b1862	0.39	-0.3
1,944,560	-	yebB	b1862	0.47	-1.4
1,944,582	+	yebB	b1862	0.51	+0.0
1,944,622	+	yebB	b1862	0.58	+0.5
1,944,625	-	yebB	b1862	0.58	+0.0
1,944,625	-	yebB	b1862	0.58	-0.3
1,944,625	-	yebB	b1862	0.58	+1.0
1,944,669	-	yebB	b1862	0.65	+0.9
1,944,674	-	yebB	b1862	0.66	+1.0
1,944,723	-	yebB	b1862	0.74	+0.2
1,944,818	+				+0.3
1,944,818	+				+1.4
1,944,826	-				+0.6
1,944,826	-				+0.4
1,944,829	+				+0.2
1,944,846	-				+0.3
1,944,885	-				-0.1
1,944,885	-				-2.0
1,944,895	-				-0.1
1,944,908	+				+1.2
1,944,916	-				-0.3