Strain Fitness in Escherichia coli BW25113 around b1123

Experiment: capsaicin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 2 mM
1,180,234	-	ycfZ	b1121	0.67	-0.0
1,180,389	-	ycfZ	b1121	0.87	+0.2
1,180,389	-	ycfZ	b1121	0.87	+0.4
1,180,438	+				-0.1
1,180,457	+				+0.0
1,180,739	-	ymfA	b1122	0.55	-0.4
1,180,755	-	ymfA	b1122	0.58	-1.3
1,180,755	-	ymfA	b1122	0.58	+0.3
1,180,763	-	ymfA	b1122	0.60	-1.0
1,180,777	-	ymfA	b1122	0.63	-0.1
1,180,777	-	ymfA	b1122	0.63	+0.1
1,180,777	-	ymfA	b1122	0.63	-0.4
1,180,777	-	ymfA	b1122	0.63	+0.8
1,180,777	-	ymfA	b1122	0.63	+0.4
1,180,777	-	ymfA	b1122	0.63	+0.2
1,180,778	-	ymfA	b1122	0.63	+0.4
1,180,796	+	ymfA	b1122	0.67	+0.3
1,180,796	+	ymfA	b1122	0.67	-0.4
1,180,799	-	ymfA	b1122	0.68	-0.3
1,180,800	-	ymfA	b1122	0.68	+0.4
1,180,803	-	ymfA	b1122	0.68	-0.5
1,180,809	+	ymfA	b1122	0.70	+0.3
1,180,813	+	ymfA	b1122	0.71	-0.4
1,180,817	-	ymfA	b1122	0.71	-0.5
1,180,834	-	ymfA	b1122	0.75	+0.6
1,180,838	-	ymfA	b1122	0.76	+0.7
1,180,854	-	ymfA	b1122	0.79	+1.0
1,180,869	-	ymfA	b1122	0.83	-0.3
1,180,881	+	ymfA	b1122	0.85	+1.1
1,180,881	+	ymfA	b1122	0.85	+0.3
1,180,890	+	ymfA	b1122	0.87	+0.7
1,180,894	+	ymfA	b1122	0.88	+0.2
1,180,894	+	ymfA	b1122	0.88	-1.4
1,180,894	+	ymfA	b1122	0.88	+0.2
1,180,900	+	ymfA	b1122	0.89	-0.3
1,180,900	+	ymfA	b1122	0.89	-0.1
1,180,902	-				+0.2
1,180,908	-				+0.4
1,180,937	+				+0.0
1,180,945	-				+0.4
1,180,945	-				+0.5
1,180,953	-				+0.1
1,180,959	-				+0.2
1,180,988	-				+0.4
1,180,988	-				+0.3
1,180,989	-				-0.1
1,180,989	-				-0.8
1,181,036	-				+1.2
1,181,046	-				+0.9
1,181,101	+				-0.5
1,181,101	+				-1.2
1,181,170	-	potD	b1123	0.16	-1.3
1,181,280	-	potD	b1123	0.26	-1.2
1,181,280	-	potD	b1123	0.26	+0.6
1,181,421	+	potD	b1123	0.40	+0.0
1,181,480	-	potD	b1123	0.45	+0.1
1,181,522	-	potD	b1123	0.49	-0.9
1,181,539	+	potD	b1123	0.51	-0.6
1,181,547	-	potD	b1123	0.52	-0.0
1,181,547	-	potD	b1123	0.52	-1.1
1,181,556	+	potD	b1123	0.53	-0.4
1,181,556	+	potD	b1123	0.53	-2.0
1,181,581	-	potD	b1123	0.55	+0.7
1,181,684	-	potD	b1123	0.65	-0.0
1,181,721	-	potD	b1123	0.68	-0.2
1,181,839	-	potD	b1123	0.80	-0.7
1,181,865	-	potD	b1123	0.82	+1.3
1,181,918	+	potD	b1123	0.87	-1.1
1,182,003	+				-0.2
1,182,395	+	potC	b1124	0.44	-1.0
1,182,474	-	potC	b1124	0.53	-0.3
1,182,476	-	potC	b1124	0.54	-0.8
1,182,524	+	potC	b1124	0.60	-0.6
1,182,581	+	potC	b1124	0.67	-1.2
1,182,581	+	potC	b1124	0.67	-0.4
1,182,589	+	potC	b1124	0.68	-0.0
1,182,668	+	potC	b1124	0.78	-0.3
1,182,691	+	potC	b1124	0.81	-0.7
1,182,700	+	potC	b1124	0.82	-0.7
1,182,730	+	potC	b1124	0.86	-0.4
1,182,910	+				-0.8
1,182,910	+				+0.3
1,182,914	-				-0.1
1,183,032	+	potB	b1125	0.23	-0.2
1,183,032	+	potB	b1125	0.23	-0.6