Strain Fitness in Escherichia coli BW25113 around b1049

Experiment: capsaicin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	capsaicin 2 mM
1,109,233	-	mdoG	b1048	0.44	-0.9
1,109,324	-				-0.5
1,109,386	+	mdoG	b1048	0.54	-1.5
1,109,386	+	mdoG	b1048	0.54	-1.7
1,109,388	+	mdoG	b1048	0.54	-1.5
1,109,395	-	mdoG	b1048	0.54	-0.9
1,109,425	+	mdoG	b1048	0.56	-0.6
1,109,425	+	mdoG	b1048	0.56	-0.0
1,109,493	+	mdoG	b1048	0.61	-0.4
1,109,493	+	mdoG	b1048	0.61	-0.1
1,109,501	-	mdoG	b1048	0.61	-2.2
1,109,501	-	mdoG	b1048	0.61	+0.3
1,109,501	-	mdoG	b1048	0.61	+1.5
1,109,704	-	mdoG	b1048	0.75	-0.3
1,109,704	-	mdoG	b1048	0.75	-0.8
1,109,785	-	mdoG	b1048	0.80	+0.3
1,109,806	-	mdoG	b1048	0.81	-1.0
1,109,945	+				+0.7
1,109,954	-				-1.5
1,110,148	+				-0.5
1,110,215	+				+0.2
1,110,215	+				-0.4
1,110,259	-				-0.2
1,110,259	-				+0.6
1,110,260	+				-1.4
1,110,269	-				-0.6
1,110,432	-	mdoH	b1049	0.14	+0.1
1,110,432	-	mdoH	b1049	0.14	-0.3
1,110,546	+				-0.4
1,110,546	+				+0.3
1,110,546	+	mdoH	b1049	0.18	-0.9
1,110,554	-	mdoH	b1049	0.18	-0.2
1,110,554	-	mdoH	b1049	0.18	-2.1
1,110,606	-	mdoH	b1049	0.20	+0.0
1,110,645	-	mdoH	b1049	0.22	-0.4
1,110,645	-	mdoH	b1049	0.22	-1.1
1,110,651	-	mdoH	b1049	0.22	-0.3
1,110,665	+	mdoH	b1049	0.23	-0.8
1,110,678	+	mdoH	b1049	0.23	-1.3
1,110,678	+	mdoH	b1049	0.23	-0.1
1,110,763	+				+0.9
1,110,800	+	mdoH	b1049	0.28	+0.7
1,110,924	+	mdoH	b1049	0.33	-1.0
1,110,924	+	mdoH	b1049	0.33	-0.5
1,110,942	+	mdoH	b1049	0.34	-0.8
1,110,950	-	mdoH	b1049	0.34	-0.9
1,110,950	-	mdoH	b1049	0.34	+0.1
1,111,075	+	mdoH	b1049	0.39	+0.4
1,111,097	+	mdoH	b1049	0.40	-1.1
1,111,099	+	mdoH	b1049	0.40	+0.2
1,111,099	+	mdoH	b1049	0.40	-0.6
1,111,183	+	mdoH	b1049	0.43	-1.5
1,111,276	-	mdoH	b1049	0.47	-0.1
1,111,276	-	mdoH	b1049	0.47	+0.5
1,111,290	-	mdoH	b1049	0.47	-1.2
1,111,421	-	mdoH	b1049	0.52	+0.3
1,111,432	-	mdoH	b1049	0.53	+0.1
1,111,448	+	mdoH	b1049	0.54	-1.8
1,111,481	+	mdoH	b1049	0.55	-0.6
1,111,591	+	mdoH	b1049	0.59	-1.5
1,111,591	+	mdoH	b1049	0.59	-0.2
1,111,599	+	mdoH	b1049	0.59	-1.8
1,111,606	-	mdoH	b1049	0.60	+0.6
1,111,630	-	mdoH	b1049	0.61	-0.2
1,111,633	-	mdoH	b1049	0.61	-0.8
1,111,641	+	mdoH	b1049	0.61	-0.9
1,111,686	+	mdoH	b1049	0.63	-0.2
1,111,686	+	mdoH	b1049	0.63	-0.4
1,111,745	+	mdoH	b1049	0.65	+0.3
1,111,811	+	mdoH	b1049	0.68	+0.1
1,111,903	-	mdoH	b1049	0.71	+0.4
1,111,938	+	mdoH	b1049	0.73	+0.2
1,111,949	+	mdoH	b1049	0.73	-0.6
1,111,989	+	mdoH	b1049	0.75	+0.0
1,112,054	+	mdoH	b1049	0.77	-0.4
1,112,082	+	mdoH	b1049	0.78	-1.4
1,112,085	-	mdoH	b1049	0.79	+0.5
1,112,096	+	mdoH	b1049	0.79	-1.5
1,112,136	-	mdoH	b1049	0.81	+0.1
1,112,162	-	mdoH	b1049	0.82	-0.5
1,112,178	+	mdoH	b1049	0.82	-0.2
1,112,261	-	mdoH	b1049	0.85	-0.2
1,112,269	+	mdoH	b1049	0.86	+0.0
1,112,344	-	mdoH	b1049	0.89	+1.1
1,112,478	+				+0.1
1,112,561	-				-0.4
1,112,670	-				+0.0
1,112,866	+	yceK	b1050	0.28	+0.2
1,113,040	+				-0.1
1,113,040	+				-0.5
1,113,311	-	msyB	b1051	0.75	+1.5
1,113,311	-	msyB	b1051	0.75	+0.5
1,113,450	-				+0.3
1,113,524	-				+0.5
1,113,533	+				-0.0
1,113,533	+				+0.5