Strain Fitness in Escherichia coli BW25113 around b2263
Experiment: 2,4-Dinitrophenol 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 1 mM |
---|---|---|---|---|---|
remove | |||||
2,373,925 | + | +0.2 | |||
2,373,930 | + | +0.1 | |||
2,373,930 | + | +1.2 | |||
2,374,136 | + | menB | b2262 | 0.18 | -0.2 |
2,374,254 | - | menB | b2262 | 0.31 | -0.3 |
2,374,373 | + | menB | b2262 | 0.45 | -0.4 |
2,374,491 | + | menB | b2262 | 0.59 | +0.4 |
2,374,673 | - | menB | b2262 | 0.80 | +0.1 |
2,374,831 | + | +0.0 | |||
2,374,831 | + | -0.2 | |||
2,374,885 | + | +0.0 | |||
2,374,893 | - | -1.0 | |||
2,375,223 | - | yfbB | b2263 | 0.48 | -0.6 |
2,375,307 | - | yfbB | b2263 | 0.59 | -0.7 |
2,375,363 | - | yfbB | b2263 | 0.67 | -0.7 |
2,375,570 | + | +0.5 | |||
2,375,570 | + | +0.7 | |||
2,375,616 | - | +0.4 | |||
2,375,616 | - | +0.3 | |||
2,375,795 | - | menD | b2264 | 0.11 | +0.5 |
2,376,112 | - | menD | b2264 | 0.30 | +0.6 |
2,376,143 | - | menD | b2264 | 0.32 | -0.1 |
2,376,143 | - | menD | b2264 | 0.32 | +0.2 |
2,376,359 | + | menD | b2264 | 0.45 | -0.3 |
2,376,359 | + | menD | b2264 | 0.45 | -0.5 |
2,376,515 | + | menD | b2264 | 0.54 | -0.0 |
2,376,554 | - | menD | b2264 | 0.56 | +0.8 |
2,376,585 | + | menD | b2264 | 0.58 | +0.3 |
2,376,585 | + | menD | b2264 | 0.58 | +0.8 |
2,376,605 | + | menD | b2264 | 0.59 | +0.4 |
Or see this region's nucleotide sequence