Strain Fitness in Escherichia coli BW25113 around b1623
Experiment: 2,4-Dinitrophenol 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,699,279 | + | malY | b1622 | 0.25 | +0.4 |
| 1,699,279 | + | malY | b1622 | 0.25 | +0.8 |
| 1,699,546 | + | malY | b1622 | 0.48 | -0.1 |
| 1,699,546 | + | malY | b1622 | 0.48 | +0.1 |
| 1,699,566 | - | malY | b1622 | 0.50 | +0.1 |
| 1,699,796 | + | malY | b1622 | 0.69 | +0.4 |
| 1,700,152 | + | +0.0 | |||
| 1,700,214 | + | -0.7 | |||
| 1,700,313 | - | -0.6 | |||
| 1,700,327 | + | -0.1 | |||
| 1,700,572 | - | add | b1623 | 0.31 | -0.9 |
| 1,700,727 | + | add | b1623 | 0.47 | -0.3 |
| 1,700,929 | - | add | b1623 | 0.67 | -0.9 |
| 1,701,020 | + | add | b1623 | 0.76 | +0.3 |
| 1,701,061 | - | add | b1623 | 0.80 | -0.8 |
| 1,701,086 | - | add | b1623 | 0.83 | +0.1 |
| 1,701,086 | - | add | b1623 | 0.83 | -0.7 |
| 1,701,146 | + | add | b1623 | 0.89 | -0.8 |
| 1,701,449 | + | b1624 | b1624 | 0.15 | -0.3 |
| 1,701,449 | + | b1624 | b1624 | 0.15 | +0.7 |
| 1,701,496 | - | b1624 | b1624 | 0.20 | +1.3 |
| 1,701,496 | - | b1624 | b1624 | 0.20 | -0.1 |
| 1,701,536 | + | b1624 | b1624 | 0.23 | -0.5 |
| 1,701,612 | - | b1624 | b1624 | 0.31 | +0.4 |
| 1,701,697 | + | b1624 | b1624 | 0.39 | +0.5 |
| 1,701,798 | + | b1624 | b1624 | 0.49 | +0.5 |
| 1,701,798 | + | b1624 | b1624 | 0.49 | +0.2 |
| 1,701,813 | - | b1624 | b1624 | 0.50 | +0.0 |
| 1,701,813 | - | b1624 | b1624 | 0.50 | +0.9 |
| 1,701,886 | - | b1624 | b1624 | 0.57 | -0.1 |
| 1,701,923 | + | b1624 | b1624 | 0.61 | -0.4 |
| 1,701,972 | - | b1624 | b1624 | 0.65 | +0.2 |
| 1,701,988 | + | b1624 | b1624 | 0.67 | +0.8 |
| 1,701,988 | + | b1624 | b1624 | 0.67 | +0.3 |
| 1,702,175 | - | b1624 | b1624 | 0.85 | +1.4 |
Or see this region's nucleotide sequence