Strain Fitness in Escherichia coli BW25113 around b1443
Experiment: 2,4-Dinitrophenol 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 1 mM |
---|---|---|---|---|---|
remove | |||||
1,511,886 | + | +0.8 | |||
1,511,886 | + | -0.7 | |||
1,512,028 | - | ydcU | b1442 | 0.18 | +0.1 |
1,512,111 | - | ydcU | b1442 | 0.27 | -0.2 |
1,512,111 | - | ydcU | b1442 | 0.27 | +0.2 |
1,512,133 | + | ydcU | b1442 | 0.30 | +0.3 |
1,512,192 | - | ydcU | b1442 | 0.36 | -1.0 |
1,512,192 | - | ydcU | b1442 | 0.36 | -1.1 |
1,512,194 | + | ydcU | b1442 | 0.36 | -0.2 |
1,512,269 | - | ydcU | b1442 | 0.44 | -0.1 |
1,512,470 | - | ydcU | b1442 | 0.65 | +0.1 |
1,512,754 | - | -1.1 | |||
1,512,754 | - | +0.4 | |||
1,512,889 | - | ydcV | b1443 | 0.13 | -1.0 |
1,512,964 | - | ydcV | b1443 | 0.22 | -0.4 |
1,512,964 | - | ydcV | b1443 | 0.22 | -1.3 |
1,513,150 | - | ydcV | b1443 | 0.46 | +0.3 |
1,513,161 | - | ydcV | b1443 | 0.47 | -0.6 |
1,513,161 | - | ydcV | b1443 | 0.47 | -0.5 |
1,513,229 | + | ydcV | b1443 | 0.56 | -0.0 |
1,513,229 | + | ydcV | b1443 | 0.56 | -1.5 |
1,514,101 | + | ydcW | b1444 | 0.35 | +0.1 |
1,514,310 | - | ydcW | b1444 | 0.50 | +0.2 |
1,514,401 | + | ydcW | b1444 | 0.56 | +0.4 |
1,514,401 | + | ydcW | b1444 | 0.56 | -0.3 |
1,514,435 | + | ydcW | b1444 | 0.58 | -0.2 |
1,514,503 | + | ydcW | b1444 | 0.63 | +0.0 |
Or see this region's nucleotide sequence