Strain Fitness in Escherichia coli BW25113 around b2456
Experiment: 2,4-Dinitrophenol 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 1 mM |
---|---|---|---|---|---|
remove | |||||
2,568,891 | - | eutE | b2455 | 0.37 | +1.2 |
2,568,932 | + | eutE | b2455 | 0.40 | +0.2 |
2,568,932 | + | eutE | b2455 | 0.40 | +0.5 |
2,568,937 | + | eutE | b2455 | 0.40 | +0.5 |
2,568,937 | + | eutE | b2455 | 0.40 | +0.3 |
2,569,130 | + | eutE | b2455 | 0.54 | -0.0 |
2,569,252 | - | eutE | b2455 | 0.63 | +1.3 |
2,569,252 | - | eutE | b2455 | 0.63 | +1.2 |
2,569,362 | + | eutE | b2455 | 0.71 | +1.3 |
2,569,362 | + | eutE | b2455 | 0.71 | +0.6 |
2,569,464 | - | eutE | b2455 | 0.78 | +0.1 |
2,569,734 | + | +1.3 | |||
2,569,820 | + | cchB | b2456 | 0.12 | +0.8 |
2,569,837 | + | cchB | b2456 | 0.18 | +0.2 |
2,569,849 | - | cchB | b2456 | 0.22 | +2.8 |
2,569,849 | - | cchB | b2456 | 0.22 | +3.0 |
2,570,117 | - | +3.1 | |||
2,570,168 | + | -0.3 | |||
2,570,168 | + | -0.1 | |||
2,570,261 | - | cchA | b2457 | 0.28 | +0.8 |
2,570,318 | - | cchA | b2457 | 0.47 | +2.5 |
2,570,350 | + | cchA | b2457 | 0.58 | +0.2 |
2,570,353 | - | cchA | b2457 | 0.59 | +1.8 |
2,570,353 | - | cchA | b2457 | 0.59 | +3.6 |
2,570,368 | - | cchA | b2457 | 0.64 | +2.6 |
2,570,435 | + | cchA | b2457 | 0.87 | +0.4 |
2,570,435 | + | cchA | b2457 | 0.87 | +0.7 |
2,570,490 | - | +2.7 | |||
2,570,502 | - | +3.0 | |||
2,570,654 | - | eutI | b2458 | 0.14 | +3.1 |
2,570,989 | + | eutI | b2458 | 0.47 | -0.3 |
2,570,989 | + | eutI | b2458 | 0.47 | -0.0 |
2,571,039 | + | eutI | b2458 | 0.52 | +1.6 |
2,571,065 | - | eutI | b2458 | 0.54 | +3.1 |
Or see this region's nucleotide sequence