Strain Fitness in Escherichia coli BW25113 around b2378

Experiment: 2,4-Dinitrophenol 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 1 mM
2,492,687	-				+0.5
2,492,771	-	ypdI	b2376	0.18	-0.7
2,492,771	-	ypdI	b2376	0.18	-0.3
2,492,771	-	ypdI	b2376	0.18	+0.7
2,492,771	-	ypdI	b2376	0.18	-0.3
2,492,818	-	ypdI	b2376	0.36	+0.4
2,492,818	-	ypdI	b2376	0.36	+0.4
2,492,826	-	ypdI	b2376	0.38	+1.6
2,492,828	-	ypdI	b2376	0.39	+0.2
2,492,848	+	ypdI	b2376	0.46	+0.8
2,492,855	+	ypdI	b2376	0.49	-1.2
2,492,861	-	ypdI	b2376	0.51	+0.1
2,492,865	+	ypdI	b2376	0.53	+0.1
2,492,873	-	ypdI	b2376	0.55	+0.8
2,492,873	-	ypdI	b2376	0.55	+1.1
2,492,929	-	ypdI	b2376	0.76	-0.0
2,492,929	-	ypdI	b2376	0.76	+0.5
2,493,005	+				+0.0
2,493,043	-				+0.2
2,493,043	-				+0.8
2,493,043	-				+0.3
2,493,056	+				-0.5
2,493,061	+				+0.8
2,493,064	-				-1.1
2,493,064	-				+1.5
2,493,075	-				+0.1
2,493,075	-				+0.5
2,493,081	+				+0.1
2,493,081	+				+0.9
2,493,095	-				+0.2
2,493,159	-	yfdY	b2377	0.36	+0.3
2,493,159	-	yfdY	b2377	0.36	+0.1
2,493,220	+	yfdY	b2377	0.61	-0.7
2,493,267	-	yfdY	b2377	0.80	-1.4
2,493,267	-	yfdY	b2377	0.80	-0.2
2,493,436	+				+0.2
2,493,551	+				-0.4
2,493,551	+				-0.7
2,493,568	-				+0.5
2,493,627	-				-0.9
2,493,627	-				-0.1
2,493,657	-				+0.5
2,493,667	-				+1.2
2,493,667	-				-0.3
2,493,762	+	ddg	b2378	0.10	+0.4
2,493,833	+	ddg	b2378	0.18	+0.5
2,493,833	+	ddg	b2378	0.18	+0.9
2,493,878	+	ddg	b2378	0.23	+0.1
2,493,924	+	ddg	b2378	0.28	-1.1
2,493,936	+	ddg	b2378	0.29	+0.6
2,493,965	-	ddg	b2378	0.32	+0.6
2,494,277	-	ddg	b2378	0.66	-0.4
2,494,430	+	ddg	b2378	0.83	-0.3
2,494,446	+	ddg	b2378	0.85	-0.2
2,494,446	+	ddg	b2378	0.85	-0.2
2,494,522	-				+0.3
2,494,524	+				-0.3
2,494,527	+				-0.8
2,494,527	+				-0.5
2,494,527	+				-0.7
2,494,769	+				-0.3
2,494,795	-				+0.4
2,494,815	-				+0.1
2,494,883	+				+0.4
2,494,968	+	ypdK	b4680	0.35	+0.1
2,495,161	-				+0.0
2,495,163	-				+0.3
2,495,163	-				-0.1
2,495,165	+				-0.6
2,495,358	+	yfdZ	b2379	0.23	+1.4
2,495,371	+	yfdZ	b2379	0.24	+0.3
2,495,404	+	yfdZ	b2379	0.26	-0.7
2,495,412	-	yfdZ	b2379	0.27	-0.4
2,495,412	-	yfdZ	b2379	0.27	+0.4
2,495,444	-	yfdZ	b2379	0.29	+0.1
2,495,444	-	yfdZ	b2379	0.29	-0.4
2,495,480	-	yfdZ	b2379	0.32	-0.2
2,495,480	-	yfdZ	b2379	0.32	+0.1