Experiment: LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF811 and GFF812 overlap by 1 nucleotides GFF812 and GFF813 are separated by 126 nucleotides GFF813 and GFF814 are separated by 131 nucleotides
GFF811 - Phage tail length tape-measure protein 1, at 155,689 to 158,850
GFF811
GFF812 - Phage minor tail protein, at 158,850 to 159,179
GFF812
GFF813 - Attachment invasion locus protein precursor, at 159,306 to 159,824
GFF813
GFF814 - Phage minor tail protein, at 159,956 to 160,651
GFF814
Position (kb) 158
159
160 Strain fitness (log2 ratio) -1
0
1 at 158.058 kb on - strand, within GFF811 at 158.122 kb on + strand, within GFF811 at 158.388 kb on + strand, within GFF811 at 158.509 kb on + strand, within GFF811 at 158.628 kb on + strand at 158.701 kb on + strand at 158.701 kb on + strand at 158.882 kb on + strand at 158.963 kb on + strand, within GFF812 at 158.979 kb on + strand, within GFF812 at 158.993 kb on - strand, within GFF812 at 159.078 kb on + strand, within GFF812 at 159.194 kb on - strand at 159.287 kb on - strand at 159.334 kb on + strand at 159.380 kb on + strand, within GFF813 at 159.386 kb on - strand, within GFF813 at 159.404 kb on + strand, within GFF813 at 159.532 kb on - strand, within GFF813 at 159.616 kb on - strand, within GFF813 at 159.619 kb on + strand, within GFF813 at 159.620 kb on - strand, within GFF813 at 159.662 kb on + strand, within GFF813 at 159.662 kb on + strand, within GFF813 at 159.725 kb on + strand, within GFF813 at 159.744 kb on + strand, within GFF813 at 159.750 kb on + strand, within GFF813 at 159.750 kb on + strand, within GFF813 at 159.750 kb on + strand, within GFF813 at 159.751 kb on - strand, within GFF813 at 159.863 kb on + strand at 159.907 kb on + strand at 159.925 kb on - strand at 160.061 kb on + strand, within GFF814 at 160.061 kb on + strand, within GFF814 at 160.065 kb on - strand, within GFF814 at 160.117 kb on + strand, within GFF814 at 160.117 kb on + strand, within GFF814 at 160.117 kb on + strand, within GFF814 at 160.118 kb on - strand, within GFF814
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI remove 158,058 - GFF811 0.75 -1.3 158,122 + GFF811 0.77 -0.4 158,388 + GFF811 0.85 +0.1 158,509 + GFF811 0.89 -0.2 158,628 + +0.1 158,701 + +0.2 158,701 + +0.1 158,882 + -0.1 158,963 + GFF812 0.34 -0.2 158,979 + GFF812 0.39 -0.9 158,993 - GFF812 0.43 -1.5 159,078 + GFF812 0.69 -0.4 159,194 - +0.5 159,287 - -1.0 159,334 + -0.3 159,380 + GFF813 0.14 -0.5 159,386 - GFF813 0.15 +0.0 159,404 + GFF813 0.19 +0.1 159,532 - GFF813 0.44 -0.2 159,616 - GFF813 0.60 -0.1 159,619 + GFF813 0.60 -0.5 159,620 - GFF813 0.61 -0.0 159,662 + GFF813 0.69 +0.1 159,662 + GFF813 0.69 +0.3 159,725 + GFF813 0.81 -0.1 159,744 + GFF813 0.84 -0.1 159,750 + GFF813 0.86 -0.1 159,750 + GFF813 0.86 -0.3 159,750 + GFF813 0.86 -0.3 159,751 - GFF813 0.86 -0.1 159,863 + +0.2 159,907 + +0.2 159,925 - -0.0 160,061 + GFF814 0.15 +0.3 160,061 + GFF814 0.15 -0.5 160,065 - GFF814 0.16 -0.6 160,117 + GFF814 0.23 +0.1 160,117 + GFF814 0.23 -0.3 160,117 + GFF814 0.23 -0.0 160,118 - GFF814 0.23 -0.2
Or see this region's nucleotide sequence