Strain Fitness in Escherichia coli BW25113 around b1521
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
1,606,520 | - | b1520 | b1520 | 0.42 | -0.9 |
1,606,520 | - | b1520 | b1520 | 0.42 | +0.6 |
1,606,713 | + | b1520 | b1520 | 0.63 | +0.3 |
1,606,819 | + | b1520 | b1520 | 0.75 | +0.0 |
1,606,881 | + | b1520 | b1520 | 0.82 | +0.4 |
1,606,940 | + | b1520 | b1520 | 0.88 | -0.2 |
1,606,986 | + | +0.4 | |||
1,606,986 | + | +0.0 | |||
1,607,077 | + | +0.2 | |||
1,607,138 | - | +0.5 | |||
1,607,500 | + | uxaB | b1521 | 0.17 | -0.4 |
1,607,500 | + | uxaB | b1521 | 0.17 | -0.4 |
1,607,552 | - | uxaB | b1521 | 0.21 | -0.3 |
1,607,552 | - | uxaB | b1521 | 0.21 | +0.2 |
1,607,587 | + | uxaB | b1521 | 0.23 | -1.4 |
1,607,807 | - | uxaB | b1521 | 0.38 | +0.6 |
1,607,836 | + | uxaB | b1521 | 0.40 | +0.3 |
1,607,936 | + | uxaB | b1521 | 0.47 | +0.2 |
1,608,074 | + | uxaB | b1521 | 0.57 | +0.1 |
1,608,074 | + | uxaB | b1521 | 0.57 | +0.1 |
1,608,119 | + | uxaB | b1521 | 0.60 | -0.0 |
1,608,272 | - | uxaB | b1521 | 0.70 | -0.3 |
1,608,469 | - | uxaB | b1521 | 0.84 | +0.4 |
1,608,664 | - | +0.1 | |||
1,608,962 | - | +0.1 | |||
1,608,994 | + | +0.6 | |||
1,609,041 | - | yneF | b1522 | 0.12 | -0.1 |
1,609,234 | - | yneF | b1522 | 0.32 | +0.1 |
1,609,408 | - | yneF | b1522 | 0.50 | +0.4 |
Or see this region's nucleotide sequence