Strain Fitness in Escherichia coli BW25113 around b4324

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
4,551,657	+	uxuB	b4323	0.50	+1.5
4,551,657	+	uxuB	b4323	0.50	-0.8
4,551,678	-	uxuB	b4323	0.52	+0.2
4,551,680	-	uxuB	b4323	0.52	+0.8
4,551,708	-	uxuB	b4323	0.54	+0.4
4,551,749	-	uxuB	b4323	0.56	+1.6
4,551,760	+	uxuB	b4323	0.57	-0.0
4,551,760	+	uxuB	b4323	0.57	-0.2
4,551,765	+	uxuB	b4323	0.58	-0.3
4,551,771	+	uxuB	b4323	0.58	-0.3
4,551,824	+	uxuB	b4323	0.62	-0.3
4,551,844	+	uxuB	b4323	0.63	+0.2
4,551,882	+	uxuB	b4323	0.66	-0.2
4,551,977	-	uxuB	b4323	0.72	-0.2
4,551,977	-	uxuB	b4323	0.72	+0.9
4,551,980	+	uxuB	b4323	0.72	+0.5
4,551,980	+	uxuB	b4323	0.72	-0.4
4,552,028	-	uxuB	b4323	0.76	+0.5
4,552,046	+	uxuB	b4323	0.77	-0.7
4,552,075	-	uxuB	b4323	0.79	+0.2
4,552,111	+	uxuB	b4323	0.81	-3.0
4,552,111	+	uxuB	b4323	0.81	-0.3
4,552,124	-	uxuB	b4323	0.82	-0.3
4,552,172	+	uxuB	b4323	0.85	-3.2
4,552,172	+	uxuB	b4323	0.85	+0.2
4,552,173	+	uxuB	b4323	0.85	-0.3
4,552,174	-	uxuB	b4323	0.86	-1.0
4,552,185	+	uxuB	b4323	0.86	+0.3
4,552,239	-				+0.2
4,552,239	-				-0.4
4,552,239	-				-0.5
4,552,265	+				-0.8
4,552,335	+				+0.0
4,552,358	-				+1.2
4,552,457	+				+0.3
4,552,467	-				+0.9
4,552,467	-				+0.7
4,552,543	-				-0.0
4,552,575	+				-0.7
4,552,607	+				+0.2
4,552,637	+				-3.2
4,552,694	+	uxuR	b4324	0.12	-3.0
4,552,751	-	uxuR	b4324	0.20	-2.3
4,552,763	-	uxuR	b4324	0.21	-1.9
4,552,847	-	uxuR	b4324	0.32	-1.4
4,552,870	-	uxuR	b4324	0.35	-0.3
4,552,873	+	uxuR	b4324	0.35	-4.4
4,552,898	-	uxuR	b4324	0.39	-0.7
4,552,940	+	uxuR	b4324	0.44	+0.3
4,552,950	+	uxuR	b4324	0.45	-1.9
4,552,950	+	uxuR	b4324	0.45	-1.3
4,553,004	-	uxuR	b4324	0.52	-1.2
4,553,026	+	uxuR	b4324	0.55	-2.1
4,553,081	-	uxuR	b4324	0.62	-2.6
4,553,082	+	uxuR	b4324	0.62	-1.0
4,553,082	+	uxuR	b4324	0.62	-2.3
4,553,102	-	uxuR	b4324	0.65	-1.6
4,553,117	-	uxuR	b4324	0.67	-1.7
4,553,117	-	uxuR	b4324	0.67	-2.7
4,553,148	+	uxuR	b4324	0.71	-3.2
4,553,155	-	uxuR	b4324	0.72	-0.9
4,553,158	+	uxuR	b4324	0.72	-4.2
4,553,158	+	uxuR	b4324	0.72	-0.9
4,553,163	-	uxuR	b4324	0.73	-1.9
4,553,176	+	uxuR	b4324	0.75	-3.3
4,553,176	+	uxuR	b4324	0.75	-2.7
4,553,179	+	uxuR	b4324	0.75	-3.0
4,553,179	+	uxuR	b4324	0.75	-3.5
4,553,182	+	uxuR	b4324	0.75	-2.2
4,553,182	+	uxuR	b4324	0.75	-0.5
4,553,194	-	uxuR	b4324	0.77	-0.6
4,553,197	+	uxuR	b4324	0.77	-2.7
4,553,197	+	uxuR	b4324	0.77	-2.4
4,553,201	+	uxuR	b4324	0.78	-2.0
4,553,248	+	uxuR	b4324	0.84	-1.9
4,553,248	+	uxuR	b4324	0.84	-1.7
4,553,249	+	uxuR	b4324	0.84	-1.1
4,553,249	+	uxuR	b4324	0.84	-1.8
4,553,256	+	uxuR	b4324	0.85	-0.7
4,553,281	+	uxuR	b4324	0.88	-1.9
4,553,281	+	uxuR	b4324	0.88	-0.9
4,553,291	+	uxuR	b4324	0.89	-1.5
4,553,330	+				-2.3
4,553,330	+				-2.3
4,553,336	+				-1.4
4,553,336	+				-0.9
4,553,344	-				-0.7
4,553,349	+				-0.4
4,553,361	+				-1.1
4,553,376	+				-0.0
4,553,386	+				+0.7
4,553,393	+				+0.1
4,553,482	-				+0.2
4,553,483	-				+0.2
4,553,484	-				+0.1
4,553,496	-				-1.4
4,553,565	-				+0.3
4,553,576	-				+0.6
4,553,581	-				+0.2
4,553,583	-				-0.4
4,553,583	-				+0.8
4,553,583	-				-0.5
4,553,591	+				-0.8
4,553,591	-				-0.1
4,553,591	-				-0.4
4,553,594	-				-0.2
4,553,596	-	yjiC	b4325	0.10	-0.0
4,553,663	-	yjiC	b4325	0.18	-0.8
4,553,663	-	yjiC	b4325	0.18	+0.3
4,553,669	-	yjiC	b4325	0.19	-0.4
4,553,669	-	yjiC	b4325	0.19	+0.2
4,553,685	-	yjiC	b4325	0.21	-1.8
4,553,685	-	yjiC	b4325	0.21	-3.1
4,553,798	-	yjiC	b4325	0.34	-0.3
4,553,936	-	yjiC	b4325	0.51	+0.2
4,553,988	-	yjiC	b4325	0.57	-0.2
4,554,070	-	yjiC	b4325	0.67	-0.1