Strain Fitness in Escherichia coli BW25113 around b3859

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
4,039,540	+	mobA	b3857	0.17	-2.5
4,039,571	-	mobA	b3857	0.23	-1.2
4,039,642	+	mobA	b3857	0.35	-1.4
4,039,717	-	mobA	b3857	0.48	+0.1
4,039,774	-	mobA	b3857	0.57	-0.4
4,039,774	-	mobA	b3857	0.57	-2.5
4,039,801	-	mobA	b3857	0.62	-2.2
4,039,821	+	mobA	b3857	0.65	-2.3
4,039,821	+	mobA	b3857	0.65	-3.2
4,039,821	+	mobA	b3857	0.65	-1.2
4,039,930	+	mobA	b3857	0.84	-1.0
4,039,962	+	mobA	b3857	0.90	-2.9
4,039,968	-				-1.0
4,039,968	-				-0.8
4,040,054	+				+0.3
4,040,080	+				-0.4
4,040,082	-				+0.4
4,040,127	+	yihD	b3858	0.13	-0.9
4,040,236	+	yihD	b3858	0.53	-0.5
4,040,236	+	yihD	b3858	0.53	+1.0
4,040,249	+	yihD	b3858	0.58	+0.6
4,040,339	+				-2.1
4,040,405	-				-0.4
4,040,436	+				-0.7
4,040,436	+				+0.3
4,040,483	+				+0.1
4,040,483	+				-0.2
4,040,483	-				+0.0
4,040,505	-				-0.1
4,040,520	+				-1.0
4,040,526	+				+0.1
4,040,554	-	yihE	b3859	0.12	+0.2
4,040,699	-	yihE	b3859	0.26	+0.3
4,040,702	+	yihE	b3859	0.27	+1.1
4,040,716	+	yihE	b3859	0.28	-0.0
4,040,759	+	yihE	b3859	0.33	+0.4
4,040,759	+	yihE	b3859	0.33	-0.6
4,040,803	-	yihE	b3859	0.37	+1.9
4,040,808	-	yihE	b3859	0.37	-0.1
4,040,815	+	yihE	b3859	0.38	+0.5
4,040,895	+	yihE	b3859	0.46	-0.3
4,040,895	+	yihE	b3859	0.46	+0.2
4,040,922	+	yihE	b3859	0.49	-0.1
4,040,928	+	yihE	b3859	0.50	-0.2
4,040,928	+	yihE	b3859	0.50	+1.0
4,040,928	+	yihE	b3859	0.50	-0.5
4,040,928	+	yihE	b3859	0.50	+0.8
4,040,930	+	yihE	b3859	0.50	-0.3
4,041,021	+	yihE	b3859	0.59	+0.2
4,041,021	+	yihE	b3859	0.59	-2.4
4,041,094	-	yihE	b3859	0.66	-0.2
4,041,106	-	yihE	b3859	0.68	+0.2
4,041,106	-	yihE	b3859	0.68	+0.3
4,041,168	-	yihE	b3859	0.74	+0.3
4,041,230	-	yihE	b3859	0.80	-0.2
4,041,232	+	yihE	b3859	0.80	+0.0
4,041,281	+	yihE	b3859	0.85	-0.3
4,041,286	+	yihE	b3859	0.86	+0.3
4,041,405	+				-0.8
4,041,432	-				-1.5
4,041,476	-				-2.4
4,041,493	+				-1.6
4,041,493	+				-1.4
4,041,511	+	dsbA	b3860	0.11	-3.1
4,041,511	+	dsbA	b3860	0.11	-3.2
4,041,511	-	dsbA	b3860	0.11	-1.2
4,041,516	+	dsbA	b3860	0.12	-2.6
4,041,518	+	dsbA	b3860	0.12	-1.5
4,041,536	-	dsbA	b3860	0.15	-0.6
4,041,581	+	dsbA	b3860	0.22	-2.8
4,041,699	-	dsbA	b3860	0.41	-1.7
4,041,704	-	dsbA	b3860	0.42	-0.9
4,041,719	+	dsbA	b3860	0.44	-2.6
4,041,722	-	dsbA	b3860	0.45	-3.0
4,041,752	+	dsbA	b3860	0.50	-3.0
4,041,763	+	dsbA	b3860	0.51	-2.3
4,041,813	+	dsbA	b3860	0.59	-2.4
4,041,813	+	dsbA	b3860	0.59	-2.8
4,041,845	+	dsbA	b3860	0.64	-1.1
4,041,845	+	dsbA	b3860	0.64	-2.2
4,041,855	+	dsbA	b3860	0.66	-2.9
4,041,870	+	dsbA	b3860	0.68	-2.1
4,041,870	+	dsbA	b3860	0.68	-2.1
4,041,870	+	dsbA	b3860	0.68	-1.3
4,041,873	+	dsbA	b3860	0.69	-2.7
4,041,930	+	dsbA	b3860	0.78	-1.9
4,041,930	+	dsbA	b3860	0.78	-2.0
4,041,944	+	dsbA	b3860	0.80	-1.7
4,041,945	+	dsbA	b3860	0.80	-1.6
4,041,945	+	dsbA	b3860	0.80	-2.6
4,041,959	+	dsbA	b3860	0.83	-2.4
4,041,967	+	dsbA	b3860	0.84	-0.6
4,041,976	+	dsbA	b3860	0.85	-0.5
4,041,980	+	dsbA	b3860	0.86	-2.4
4,041,980	+	dsbA	b3860	0.86	-2.8
4,041,989	+	dsbA	b3860	0.87	-2.6
4,041,989	+	dsbA	b3860	0.87	-1.8
4,041,989	+	dsbA	b3860	0.87	-1.0
4,041,989	+	dsbA	b3860	0.87	-2.8
4,041,989	+	dsbA	b3860	0.87	-2.3
4,041,989	+	dsbA	b3860	0.87	-0.8
4,041,989	+	dsbA	b3860	0.87	-1.6
4,041,989	+	dsbA	b3860	0.87	-1.3
4,041,990	+	dsbA	b3860	0.88	-2.2
4,041,991	+	dsbA	b3860	0.88	-2.9
4,041,991	+	dsbA	b3860	0.88	-1.8
4,041,991	+	dsbA	b3860	0.88	-2.2
4,041,991	+	dsbA	b3860	0.88	-3.3
4,041,995	+	dsbA	b3860	0.88	-2.7
4,042,020	+				-1.6
4,042,020	+				-3.2
4,042,025	+				-3.3
4,042,025	+				-2.6
4,042,025	+				-3.2
4,042,025	+				-0.6
4,042,025	+				-1.9
4,042,025	+				-2.1
4,042,025	+				-0.6
4,042,028	+				-1.0
4,042,031	+				-2.1
4,042,031	+				-2.6
4,042,031	+				-1.7
4,042,031	+				-2.2
4,042,031	+				-2.4
4,042,031	+				-2.0
4,042,031	+				-2.4
4,042,031	+				-1.3
4,042,031	+				-2.2
4,042,031	+				-1.3
4,042,032	+				-0.3
4,042,033	+				-1.7
4,042,033	+				-1.0
4,042,082	+				-0.3
4,042,082	+				-2.9
4,042,174	+				+0.0
4,042,264	-				-0.2
4,042,284	+				+0.0
4,042,284	+				+0.3
4,042,288	-				-0.3
4,042,292	-				+0.4
4,042,295	-				-0.8
4,042,295	-				+0.5
4,042,295	-				+1.0
4,042,365	+	yihF	b3861	0.10	-0.1