Strain Fitness in Escherichia coli BW25113 around b3793

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
3,975,665	+	rffT	b4481	0.11	-2.5
3,975,679	+	rffT	b4481	0.12	-1.5
3,975,679	+	rffT	b4481	0.12	-0.6
3,975,681	-	rffT	b4481	0.12	-3.8
3,975,694	-	rffT	b4481	0.14	-1.3
3,975,715	+	rffT	b4481	0.15	-1.5
3,975,715	+	rffT	b4481	0.15	-2.0
3,975,749	+	rffT	b4481	0.19	-0.1
3,975,760	+	rffT	b4481	0.20	-2.8
3,975,807	+	rffT	b4481	0.24	-2.6
3,975,807	+	rffT	b4481	0.24	-0.6
3,975,815	+	rffT	b4481	0.25	-2.5
3,975,815	-	rffT	b4481	0.25	-2.2
3,975,827	-	rffT	b4481	0.26	-2.4
3,975,827	-	rffT	b4481	0.26	-2.4
3,975,832	-	rffT	b4481	0.26	-2.6
3,975,848	-	rffT	b4481	0.28	-1.2
3,975,849	-	rffT	b4481	0.28	-1.9
3,975,849	-	rffT	b4481	0.28	-1.0
3,975,884	+	rffT	b4481	0.31	-1.3
3,976,051	-	rffT	b4481	0.47	-1.8
3,976,057	+	rffT	b4481	0.47	-0.9
3,976,057	+	rffT	b4481	0.47	-3.0
3,976,148	+	rffT	b4481	0.56	-2.8
3,976,148	+	rffT	b4481	0.56	-2.1
3,976,253	+	rffT	b4481	0.65	-2.3
3,976,317	+	rffT	b4481	0.71	-1.3
3,976,396	+	rffT	b4481	0.79	-4.7
3,976,447	+	rffT	b4481	0.83	-1.4
3,976,480	-	rffT	b4481	0.86	-1.1
3,976,538	+				-1.2
3,976,608	+				-0.7
3,976,608	+				-0.1
3,976,626	-				-1.1
3,978,002	+				+0.3
3,978,004	+				-2.0
3,978,004	+				-2.6
3,978,004	+				-2.0
3,978,012	-				-2.4
3,978,017	-				-0.2
3,978,017	-				+0.2
3,978,024	+				-2.8
3,978,056	-	rffM	b3794	0.10	-1.2
3,978,066	-	rffM	b3794	0.12	-2.4
3,978,066	-	rffM	b3794	0.12	-2.0
3,978,083	+	rffM	b3794	0.14	-2.8
3,978,090	-	rffM	b3794	0.15	-3.1
3,978,138	-	rffM	b3794	0.21	-3.2
3,978,138	-	rffM	b3794	0.21	-2.6
3,978,140	-	rffM	b3794	0.22	-2.1
3,978,167	-	rffM	b3794	0.25	-2.3
3,978,199	+	rffM	b3794	0.30	-1.4
3,978,199	+	rffM	b3794	0.30	-1.8
3,978,202	-	rffM	b3794	0.30	-2.8
3,978,249	-	rffM	b3794	0.36	-4.0
3,978,274	+	rffM	b3794	0.40	-2.8
3,978,274	+	rffM	b3794	0.40	-3.4
3,978,291	+	rffM	b3794	0.42	-3.4
3,978,314	-	rffM	b3794	0.45	-2.4
3,978,314	-	rffM	b3794	0.45	-2.5
3,978,323	+	rffM	b3794	0.46	-2.7
3,978,323	+	rffM	b3794	0.46	-1.4
3,978,472	+	rffM	b3794	0.67	-1.0
3,978,472	+	rffM	b3794	0.67	-3.0
3,978,540	+	rffM	b3794	0.76	-2.0
3,978,540	+	rffM	b3794	0.76	-3.8
3,978,542	+	rffM	b3794	0.76	-2.3
3,978,542	+	rffM	b3794	0.76	-2.0
3,978,542	+	rffM	b3794	0.76	-2.9
3,978,550	-	rffM	b3794	0.77	-3.1
3,978,570	+	rffM	b3794	0.80	-2.0
3,978,618	+	rffM	b3794	0.86	-2.0
3,978,618	+	rffM	b3794	0.86	-2.7
3,978,693	-				-0.3
3,978,693	-				-0.3
3,978,698	+				-0.1
3,978,709	-				+0.6
3,978,753	-				-0.1
3,978,858	-				-2.2
3,978,858	-				+0.6
3,978,863	+				+1.8
3,978,886	+				+0.2
3,978,886	+				-1.7
3,978,896	-				+0.2
3,978,928	+				+0.1
3,978,944	-				-0.0
3,978,956	+				-0.1
3,978,956	+				-0.1
3,978,970	+				-0.0
3,978,970	+				-0.1