Strain Fitness in Escherichia coli BW25113 around b3705

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
3,882,110	+				+0.0
3,882,110	+				+1.4
3,882,118	-				+1.0
3,882,118	-				+1.1
3,882,120	-				+1.0
3,882,163	+				-0.2
3,882,172	-				+1.3
3,882,876	-	yidD	b4557	0.14	-1.3
3,882,876	-	yidD	b4557	0.14	+0.1
3,882,883	+	yidD	b4557	0.17	+0.4
3,882,901	+	yidD	b4557	0.24	-0.6
3,882,901	-	yidD	b4557	0.24	-0.1
3,882,902	-	yidD	b4557	0.24	-1.5
3,882,941	-	yidD	b4557	0.40	-1.1
3,882,960	+	yidD	b4557	0.47	-0.1
3,882,978	+	yidD	b4557	0.54	+0.8
3,883,034	+	yidD	b4557	0.76	+0.7
3,883,034	+	yidD	b4557	0.76	+0.7
3,884,716	+				-3.4
3,884,754	+				+0.1
3,884,777	+				+0.4
3,884,777	+				-0.5
3,884,817	-				+0.1
3,884,817	-				+0.8
3,884,817	-				+0.1
3,884,855	-				-0.3
3,884,855	-				-0.3
3,884,869	+				-1.5
3,884,869	+				-2.8
3,884,869	+				-3.0
3,884,869	+				-0.3
3,884,879	+				-3.2
3,884,883	-				-2.7
3,884,888	-				-1.5
3,884,897	-				-2.3
3,884,903	+				-1.6
3,884,937	-				-0.8
3,884,961	+				-2.1
3,884,961	+				-2.2
3,885,010	+	trmE	b3706	0.12	-2.8
3,885,014	+	trmE	b3706	0.12	-1.5
3,885,041	-	trmE	b3706	0.14	-3.3
3,885,051	-	trmE	b3706	0.15	-1.9
3,885,066	-	trmE	b3706	0.16	-2.5
3,885,091	+	trmE	b3706	0.18	-3.0
3,885,099	-	trmE	b3706	0.18	-2.7
3,885,129	+	trmE	b3706	0.20	-0.8
3,885,181	-	trmE	b3706	0.24	-1.7
3,885,181	-	trmE	b3706	0.24	-0.8
3,885,342	-	trmE	b3706	0.36	-2.5
3,885,342	-	trmE	b3706	0.36	-2.0
3,885,342	-	trmE	b3706	0.36	-1.4
3,885,400	-	trmE	b3706	0.40	-2.1
3,885,461	+	trmE	b3706	0.45	-3.1
3,885,480	-	trmE	b3706	0.46	-1.5
3,885,482	-	trmE	b3706	0.46	-1.5
3,885,490	+	trmE	b3706	0.47	-0.9
3,885,522	+	trmE	b3706	0.49	-3.6
3,885,689	+	trmE	b3706	0.61	-0.7
3,885,699	-	trmE	b3706	0.62	-1.4