Strain Fitness in Escherichia coli BW25113 around b3287
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
3,430,793 | + | smf | b4473 | 0.30 | +0.4 |
3,430,801 | - | smf | b4473 | 0.30 | -0.5 |
3,430,815 | - | smf | b4473 | 0.32 | -0.5 |
3,430,828 | - | smf | b4473 | 0.33 | +0.1 |
3,430,828 | - | smf | b4473 | 0.33 | +0.4 |
3,430,871 | + | smf | b4473 | 0.37 | -0.1 |
3,430,876 | + | smf | b4473 | 0.37 | +0.5 |
3,430,876 | - | smf | b4473 | 0.37 | -0.5 |
3,430,881 | - | smf | b4473 | 0.38 | +0.5 |
3,430,891 | + | smf | b4473 | 0.38 | -0.4 |
3,430,891 | + | smf | b4473 | 0.38 | +0.8 |
3,430,921 | + | smf | b4473 | 0.41 | -0.8 |
3,430,921 | + | smf | b4473 | 0.41 | +0.6 |
3,430,927 | - | smf | b4473 | 0.42 | -0.9 |
3,430,944 | - | smf | b4473 | 0.43 | -0.6 |
3,430,944 | - | smf | b4473 | 0.43 | -0.2 |
3,430,980 | - | smf | b4473 | 0.46 | +0.4 |
3,430,984 | - | smf | b4473 | 0.47 | -0.1 |
3,431,013 | + | smf | b4473 | 0.49 | +1.1 |
3,431,017 | + | smf | b4473 | 0.50 | -1.4 |
3,431,018 | + | smf | b4473 | 0.50 | -1.0 |
3,431,065 | + | smf | b4473 | 0.54 | +0.6 |
3,431,073 | - | smf | b4473 | 0.55 | -0.7 |
3,431,079 | + | smf | b4473 | 0.55 | +0.7 |
3,431,126 | + | smf | b4473 | 0.59 | -0.1 |
3,431,134 | - | smf | b4473 | 0.60 | -0.1 |
3,431,134 | - | smf | b4473 | 0.60 | -0.3 |
3,431,221 | + | smf | b4473 | 0.68 | -0.9 |
3,431,373 | + | smf | b4473 | 0.81 | +1.4 |
3,431,376 | - | smf | b4473 | 0.82 | +0.1 |
3,431,415 | - | smf | b4473 | 0.85 | -0.6 |
3,431,415 | - | smf | b4473 | 0.85 | -0.0 |
3,431,448 | + | smf | b4473 | 0.88 | -0.4 |
3,431,448 | + | smf | b4473 | 0.88 | +0.7 |
3,431,455 | - | smf | b4473 | 0.89 | -0.2 |
3,431,455 | - | smf | b4473 | 0.89 | -0.8 |
3,431,468 | + | smf | b4473 | 0.90 | -1.0 |
3,431,474 | - | +0.9 | |||
3,431,482 | + | +0.4 | |||
3,431,509 | + | +0.1 | |||
3,431,512 | + | -1.3 | |||
3,431,517 | + | +0.3 | |||
3,431,527 | - | -0.1 | |||
3,431,578 | + | -0.6 | |||
3,431,666 | - | -0.9 | |||
3,431,697 | + | +1.4 | |||
3,431,697 | + | +0.8 | |||
3,432,172 | + | -3.2 | |||
3,432,204 | + | -0.8 | |||
3,432,204 | + | -0.7 | |||
3,432,238 | + | +0.1 | |||
3,433,170 | + | -1.8 | |||
3,433,177 | + | -1.6 | |||
3,433,178 | + | -0.3 | |||
3,433,186 | - | +0.4 | |||
3,433,186 | - | +1.1 | |||
3,433,193 | + | +0.2 | |||
3,433,193 | + | +1.8 | |||
3,433,218 | + | +0.2 |
Or see this region's nucleotide sequence