Strain Fitness in Escherichia coli BW25113 around b2518
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
2,641,671 | + | yfgB | b2517 | 0.45 | -2.1 |
2,641,688 | + | yfgB | b2517 | 0.46 | +0.3 |
2,641,748 | + | yfgB | b2517 | 0.52 | -0.4 |
2,641,748 | + | yfgB | b2517 | 0.52 | -0.4 |
2,641,784 | - | yfgB | b2517 | 0.55 | -1.7 |
2,641,819 | + | yfgB | b2517 | 0.58 | -0.8 |
2,641,819 | + | yfgB | b2517 | 0.58 | -0.7 |
2,641,923 | - | yfgB | b2517 | 0.67 | -0.2 |
2,641,947 | + | yfgB | b2517 | 0.69 | -1.2 |
2,641,947 | + | yfgB | b2517 | 0.69 | -0.8 |
2,642,153 | - | yfgB | b2517 | 0.87 | -1.6 |
2,642,153 | - | yfgB | b2517 | 0.87 | -1.4 |
2,642,304 | - | +0.0 | |||
2,642,392 | - | -0.1 | |||
2,642,392 | - | -0.3 | |||
2,642,509 | - | ndk | b2518 | 0.12 | +0.7 |
2,642,509 | - | ndk | b2518 | 0.12 | +0.1 |
2,642,590 | - | ndk | b2518 | 0.31 | +1.0 |
2,642,592 | + | ndk | b2518 | 0.32 | +1.0 |
2,642,684 | - | +0.2 | |||
2,642,740 | - | ndk | b2518 | 0.66 | -0.9 |
2,642,740 | - | ndk | b2518 | 0.66 | -0.1 |
2,642,809 | + | ndk | b2518 | 0.82 | +0.6 |
2,642,937 | + | -0.3 | |||
2,643,036 | - | -0.1 | |||
2,643,081 | + | +0.1 | |||
2,643,131 | - | +0.5 | |||
2,643,171 | - | +0.2 | |||
2,643,235 | - | +0.6 | |||
2,643,235 | - | +0.2 | |||
2,643,567 | + | pbpC | b2519 | 0.23 | -0.2 |
2,643,567 | + | pbpC | b2519 | 0.23 | +0.3 |
2,643,567 | + | pbpC | b2519 | 0.23 | +0.9 |
2,643,575 | - | pbpC | b2519 | 0.23 | +0.5 |
2,643,627 | + | pbpC | b2519 | 0.26 | +0.9 |
2,643,645 | - | pbpC | b2519 | 0.26 | +0.5 |
2,643,690 | + | pbpC | b2519 | 0.28 | +0.1 |
Or see this region's nucleotide sequence