Strain Fitness in Escherichia coli BW25113 around b1991
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
2,060,520 | + | erfK | b1990 | 0.11 | -0.1 |
2,060,520 | + | erfK | b1990 | 0.11 | +0.2 |
2,060,530 | - | erfK | b1990 | 0.12 | +0.5 |
2,060,536 | + | erfK | b1990 | 0.13 | +0.5 |
2,060,573 | + | erfK | b1990 | 0.17 | +0.4 |
2,060,610 | - | erfK | b1990 | 0.21 | +0.4 |
2,060,630 | - | erfK | b1990 | 0.23 | -0.6 |
2,060,630 | - | erfK | b1990 | 0.23 | -0.3 |
2,060,715 | + | erfK | b1990 | 0.32 | -0.0 |
2,060,730 | + | erfK | b1990 | 0.34 | +0.2 |
2,060,730 | - | erfK | b1990 | 0.34 | -1.0 |
2,060,743 | - | erfK | b1990 | 0.35 | +0.2 |
2,060,743 | - | erfK | b1990 | 0.35 | +0.3 |
2,060,821 | - | erfK | b1990 | 0.44 | +0.6 |
2,060,976 | - | erfK | b1990 | 0.60 | +0.4 |
2,060,976 | - | erfK | b1990 | 0.60 | +0.4 |
2,060,983 | + | erfK | b1990 | 0.61 | -0.3 |
2,060,989 | - | erfK | b1990 | 0.62 | +0.5 |
2,061,007 | - | erfK | b1990 | 0.63 | -0.5 |
2,061,078 | - | erfK | b1990 | 0.71 | -0.6 |
2,061,200 | - | erfK | b1990 | 0.84 | -0.6 |
2,061,211 | - | erfK | b1990 | 0.85 | +0.5 |
2,061,216 | - | erfK | b1990 | 0.86 | +0.3 |
2,061,365 | - | +0.0 | |||
2,061,365 | - | +0.7 | |||
2,061,426 | - | -0.2 | |||
2,061,426 | - | +0.4 | |||
2,061,517 | + | +0.2 | |||
2,061,734 | + | cobT | b1991 | 0.30 | +0.0 |
2,061,734 | + | cobT | b1991 | 0.30 | +0.0 |
2,061,871 | + | cobT | b1991 | 0.42 | +0.3 |
2,061,871 | + | cobT | b1991 | 0.42 | +0.1 |
2,061,890 | - | cobT | b1991 | 0.44 | -0.4 |
2,061,955 | - | cobT | b1991 | 0.50 | -1.3 |
2,061,955 | - | cobT | b1991 | 0.50 | +1.0 |
2,061,974 | + | cobT | b1991 | 0.52 | +0.6 |
2,062,013 | - | cobT | b1991 | 0.56 | -0.5 |
2,062,105 | + | cobT | b1991 | 0.64 | +0.3 |
2,062,134 | - | cobT | b1991 | 0.67 | +0.6 |
2,062,134 | - | cobT | b1991 | 0.67 | -0.4 |
2,062,238 | - | cobT | b1991 | 0.76 | +0.1 |
2,062,238 | - | cobT | b1991 | 0.76 | +0.2 |
2,062,333 | + | cobT | b1991 | 0.85 | -0.1 |
2,062,333 | + | cobT | b1991 | 0.85 | +0.1 |
2,062,357 | - | cobT | b1991 | 0.88 | +0.3 |
2,062,416 | - | -2.5 | |||
2,062,704 | + | cobS | b1992 | 0.27 | -0.4 |
2,063,068 | + | cobS | b1992 | 0.76 | -0.2 |
2,063,182 | + | -0.2 | |||
2,063,182 | - | -0.1 | |||
2,063,203 | - | +1.1 | |||
2,063,378 | - | cobU | b1993 | 0.25 | +0.6 |
2,063,378 | - | cobU | b1993 | 0.25 | +0.7 |
2,063,390 | + | cobU | b1993 | 0.27 | -0.3 |
Or see this region's nucleotide sequence