Strain Fitness in Escherichia coli BW25113 around b1970
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
2,035,981 | - | yedV | b1968 | 0.86 | +0.0 |
2,035,983 | - | yedV | b1968 | 0.86 | -0.2 |
2,035,983 | - | yedV | b1968 | 0.86 | -0.2 |
2,035,986 | - | yedV | b1968 | 0.86 | +1.0 |
2,035,995 | - | yedV | b1968 | 0.87 | -0.3 |
2,036,012 | - | yedV | b1968 | 0.88 | +0.3 |
2,036,015 | - | yedV | b1968 | 0.88 | -0.4 |
2,036,015 | - | yedV | b1968 | 0.88 | +0.5 |
2,036,015 | - | yedV | b1968 | 0.88 | +0.6 |
2,036,029 | - | yedV | b1968 | 0.89 | -1.0 |
2,036,034 | - | yedV | b1968 | 0.89 | +1.5 |
2,036,042 | - | +0.2 | |||
2,036,052 | - | +0.4 | |||
2,036,121 | - | +0.2 | |||
2,036,165 | - | +0.9 | |||
2,036,203 | + | -0.3 | |||
2,036,217 | - | -0.3 | |||
2,036,272 | - | yedW | b1969 | 0.14 | -0.0 |
2,036,296 | - | yedW | b1969 | 0.18 | +1.0 |
2,036,296 | - | yedW | b1969 | 0.18 | +0.4 |
2,036,368 | - | yedW | b1969 | 0.29 | -0.3 |
2,036,374 | + | yedW | b1969 | 0.29 | +0.3 |
2,036,382 | - | yedW | b1969 | 0.31 | +0.5 |
2,036,439 | + | yedW | b1969 | 0.39 | -0.2 |
2,036,439 | + | yedW | b1969 | 0.39 | +0.5 |
2,036,439 | + | yedW | b1969 | 0.39 | +0.1 |
2,036,581 | - | yedW | b1969 | 0.60 | +0.1 |
2,036,582 | + | yedW | b1969 | 0.60 | -0.1 |
2,036,582 | + | yedW | b1969 | 0.60 | +0.1 |
2,036,582 | + | yedW | b1969 | 0.60 | -1.2 |
2,036,583 | - | yedW | b1969 | 0.61 | +0.7 |
2,036,583 | - | yedW | b1969 | 0.61 | +1.4 |
2,036,589 | - | yedW | b1969 | 0.61 | -0.1 |
2,036,591 | - | yedW | b1969 | 0.62 | +0.1 |
2,036,591 | - | yedW | b1969 | 0.62 | -0.4 |
2,036,591 | - | yedW | b1969 | 0.62 | +0.5 |
2,036,593 | + | yedW | b1969 | 0.62 | -1.4 |
2,036,606 | - | yedW | b1969 | 0.64 | +0.9 |
2,036,608 | - | yedW | b1969 | 0.64 | +1.6 |
2,036,608 | - | yedW | b1969 | 0.64 | +0.2 |
2,036,683 | - | yedW | b1969 | 0.75 | +0.3 |
2,036,688 | + | yedW | b1969 | 0.76 | +0.4 |
2,036,719 | - | yedW | b1969 | 0.81 | +0.3 |
2,036,719 | - | yedW | b1969 | 0.81 | +1.1 |
2,036,721 | - | yedW | b1969 | 0.81 | -0.4 |
2,036,732 | + | yedW | b1969 | 0.83 | +0.4 |
2,036,734 | + | yedW | b1969 | 0.83 | +0.5 |
2,036,757 | + | yedW | b1969 | 0.86 | +1.0 |
2,036,757 | + | yedW | b1969 | 0.86 | -0.2 |
2,036,766 | + | yedW | b1969 | 0.88 | +0.2 |
2,036,780 | + | +1.5 | |||
2,036,788 | - | -0.0 | |||
2,036,790 | + | +0.7 | |||
2,036,790 | + | -0.0 | |||
2,036,790 | + | -0.1 | |||
2,036,791 | + | -0.3 | |||
2,036,798 | - | -0.1 | |||
2,036,798 | - | +0.2 | |||
2,036,801 | + | +0.2 | |||
2,036,805 | + | +0.5 | |||
2,036,871 | + | -0.1 | |||
2,036,913 | + | +0.2 | |||
2,036,913 | + | +0.7 | |||
2,036,922 | - | -0.1 | |||
2,036,927 | - | -0.5 | |||
2,036,927 | - | -1.1 | |||
2,036,927 | - | +0.2 | |||
2,036,934 | + | +1.5 | |||
2,036,934 | + | -0.1 | |||
2,036,946 | + | -0.3 | |||
2,036,970 | + | -0.2 | |||
2,036,995 | + | +0.2 | |||
2,036,995 | + | -0.4 | |||
2,037,001 | - | -0.0 | |||
2,037,003 | - | -0.1 | |||
2,037,003 | - | -0.1 | |||
2,037,009 | + | -0.8 | |||
2,037,013 | - | -0.4 | |||
2,037,013 | - | +0.5 | |||
2,037,052 | - | yedX | b1970 | 0.17 | -1.2 |
2,037,060 | + | yedX | b1970 | 0.19 | -1.1 |
2,037,102 | - | yedX | b1970 | 0.29 | +0.3 |
2,037,102 | - | yedX | b1970 | 0.29 | -1.2 |
2,037,112 | - | yedX | b1970 | 0.32 | -1.4 |
2,037,118 | + | yedX | b1970 | 0.33 | +0.2 |
2,037,150 | + | yedX | b1970 | 0.41 | +0.1 |
2,037,150 | + | yedX | b1970 | 0.41 | +0.1 |
2,037,150 | + | yedX | b1970 | 0.41 | +0.5 |
2,037,198 | + | yedX | b1970 | 0.53 | -0.0 |
2,037,207 | - | yedX | b1970 | 0.55 | +0.1 |
2,037,212 | + | yedX | b1970 | 0.56 | -0.5 |
2,037,312 | - | yedX | b1970 | 0.80 | +0.9 |
2,037,332 | + | yedX | b1970 | 0.85 | -0.2 |
2,037,335 | + | yedX | b1970 | 0.86 | +1.0 |
2,037,389 | - | -0.1 | |||
2,037,438 | - | -0.9 | |||
2,037,438 | - | +0.1 | |||
2,037,448 | - | -0.0 | |||
2,037,465 | + | +0.4 | |||
2,037,623 | - | yedY | b1971 | 0.12 | +1.0 |
2,037,623 | - | yedY | b1971 | 0.12 | -0.4 |
2,037,648 | + | yedY | b1971 | 0.15 | +0.4 |
2,037,689 | + | yedY | b1971 | 0.19 | -0.6 |
2,037,689 | + | yedY | b1971 | 0.19 | -0.3 |
2,037,889 | + | yedY | b1971 | 0.39 | +0.3 |
2,037,918 | - | yedY | b1971 | 0.41 | -0.5 |
2,037,940 | + | yedY | b1971 | 0.44 | +0.8 |
2,038,260 | + | yedY | b1971 | 0.75 | +1.2 |
2,038,260 | + | yedY | b1971 | 0.75 | -1.1 |
2,038,260 | + | yedY | b1971 | 0.75 | +0.0 |
2,038,273 | - | yedY | b1971 | 0.77 | +0.4 |
2,038,370 | + | yedY | b1971 | 0.86 | +0.9 |
2,038,378 | - | yedY | b1971 | 0.87 | +0.1 |
2,038,378 | - | yedY | b1971 | 0.87 | +0.2 |
Or see this region's nucleotide sequence