Strain Fitness in Escherichia coli BW25113 around b1270
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
1,324,821 | + | +0.1 | |||
1,324,826 | + | -0.1 | |||
1,324,829 | - | -1.8 | |||
1,324,829 | - | -0.3 | |||
1,325,097 | + | rluB | b1269 | 0.25 | -1.0 |
1,325,110 | + | rluB | b1269 | 0.27 | -1.8 |
1,325,179 | + | rluB | b1269 | 0.35 | -0.7 |
1,325,179 | + | rluB | b1269 | 0.35 | -1.7 |
1,325,635 | - | rluB | b1269 | 0.87 | -1.5 |
1,325,636 | - | rluB | b1269 | 0.87 | -1.0 |
1,325,636 | - | rluB | b1269 | 0.87 | -0.2 |
1,325,814 | + | -0.5 | |||
1,325,882 | - | btuR | b1270 | 0.15 | -0.3 |
1,325,954 | - | btuR | b1270 | 0.28 | +0.5 |
1,326,099 | - | btuR | b1270 | 0.52 | -0.2 |
1,326,099 | - | btuR | b1270 | 0.52 | -0.7 |
1,326,296 | - | btuR | b1270 | 0.85 | +0.4 |
1,326,420 | + | -0.1 | |||
1,326,420 | + | +0.8 | |||
1,326,546 | + | yciK | b1271 | 0.22 | -0.3 |
1,326,719 | + | yciK | b1271 | 0.45 | +0.2 |
1,326,742 | - | yciK | b1271 | 0.48 | +0.1 |
1,326,851 | - | yciK | b1271 | 0.62 | +0.6 |
1,327,275 | + | +0.1 | |||
1,327,297 | + | -0.7 |
Or see this region's nucleotide sequence