Strain Fitness in Escherichia coli BW25113 around b1128

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
1,185,409	+	pepT	b1127	0.28	+0.4
1,185,639	+	pepT	b1127	0.47	+0.1
1,185,647	+	pepT	b1127	0.47	-0.5
1,185,720	+	pepT	b1127	0.53	+0.0
1,185,746	-	pepT	b1127	0.55	+0.3
1,185,779	-	pepT	b1127	0.58	+0.7
1,185,886	+	pepT	b1127	0.67	-0.6
1,185,986	-	pepT	b1127	0.75	+0.1
1,186,009	+	pepT	b1127	0.77	+0.4
1,186,182	-				-0.1
1,186,468	-	ycfD	b1128	0.11	-1.2
1,186,507	-	ycfD	b1128	0.15	-1.0
1,186,533	-	ycfD	b1128	0.17	-0.6
1,186,778	+	ycfD	b1128	0.39	+0.0
1,186,778	+	ycfD	b1128	0.39	-1.2
1,186,805	-	ycfD	b1128	0.41	-0.2
1,186,876	-	ycfD	b1128	0.48	-0.4
1,186,942	-	ycfD	b1128	0.53	-1.1
1,186,950	+	ycfD	b1128	0.54	-1.3
1,186,950	+	ycfD	b1128	0.54	-1.5
1,187,202	+	ycfD	b1128	0.77	-0.2
1,187,292	+	ycfD	b1128	0.85	-0.9
1,187,292	+	ycfD	b1128	0.85	-2.3
1,187,349	+	ycfD	b1128	0.90	-1.3
1,187,349	+	ycfD	b1128	0.90	-1.1
1,187,446	+				-1.0
1,187,521	+				+0.6
1,187,672	-				-2.6
1,187,672	-				+0.1
1,187,674	-				-1.6
1,187,674	-				-3.4
1,187,685	+	phoQ	b1129	0.10	-0.1
1,187,775	-	phoQ	b1129	0.16	-1.7
1,187,776	-	phoQ	b1129	0.16	-2.7
1,187,776	-	phoQ	b1129	0.16	-1.9
1,187,779	+	phoQ	b1129	0.16	-0.9
1,187,844	-	phoQ	b1129	0.21	-3.4
1,187,955	+	phoQ	b1129	0.28	-0.8
1,187,973	-	phoQ	b1129	0.30	-4.5
1,188,100	-	phoQ	b1129	0.38	-2.2
1,188,191	+	phoQ	b1129	0.45	-2.4
1,188,246	+	phoQ	b1129	0.48	-0.9
1,188,320	+	phoQ	b1129	0.53	-3.6
1,188,342	+	phoQ	b1129	0.55	-2.0
1,188,342	+	phoQ	b1129	0.55	-1.6
1,188,435	-	phoQ	b1129	0.61	-2.7
1,188,435	-	phoQ	b1129	0.61	-3.1
1,188,461	+	phoQ	b1129	0.63	-2.3