Strain Fitness in Escherichia coli BW25113 around b0471
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
493,296 | + | -1.4 | |||
493,296 | + | -2.4 | |||
493,320 | + | -1.4 | |||
493,327 | - | -3.7 | |||
493,392 | + | ybaB | b0471 | 0.28 | -4.1 |
493,488 | - | ybaB | b0471 | 0.57 | -1.0 |
493,499 | - | ybaB | b0471 | 0.60 | -1.8 |
493,499 | - | ybaB | b0471 | 0.60 | -1.8 |
493,517 | + | ybaB | b0471 | 0.66 | -1.9 |
493,713 | - | recR | b0472 | 0.14 | -1.2 |
493,724 | + | recR | b0472 | 0.16 | +0.1 |
493,879 | + | recR | b0472 | 0.41 | -0.2 |
493,882 | - | recR | b0472 | 0.42 | -0.5 |
493,887 | - | recR | b0472 | 0.43 | -1.2 |
493,887 | - | recR | b0472 | 0.43 | +0.7 |
493,949 | + | recR | b0472 | 0.53 | +0.1 |
493,993 | + | recR | b0472 | 0.60 | -1.1 |
494,016 | - | recR | b0472 | 0.64 | -0.4 |
494,016 | - | recR | b0472 | 0.64 | -0.5 |
494,016 | - | recR | b0472 | 0.64 | +0.2 |
494,018 | + | recR | b0472 | 0.64 | -0.1 |
494,057 | + | recR | b0472 | 0.71 | +0.1 |
494,074 | + | recR | b0472 | 0.73 | -1.0 |
494,094 | - | recR | b0472 | 0.77 | -0.6 |
494,099 | - | recR | b0472 | 0.78 | -0.2 |
494,115 | + | recR | b0472 | 0.80 | -0.6 |
494,211 | - | +0.2 | |||
494,211 | - | -0.3 | |||
494,211 | - | +0.7 | |||
494,291 | - | -0.5 | |||
494,345 | - | +1.4 | |||
494,345 | - | +0.7 | |||
494,448 | + | +0.1 | |||
494,517 | - | -0.9 | |||
494,561 | + | htpG | b0473 | 0.12 | -0.2 |
494,596 | - | htpG | b0473 | 0.13 | -0.4 |
494,619 | - | htpG | b0473 | 0.15 | +0.0 |
Or see this region's nucleotide sequence