Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tauC and tauD overlap by 4 nucleotides tauD and hemB are separated by 106 nucleotides hemB and yaiT are separated by 523 nucleotides
b0367: tauC - taurine transporter subunit (NCBI), at 386,195 to 387,022
tauC
b0368: tauD - taurine dioxygenase (NCBI), at 387,019 to 387,870
tauD
b0369: hemB - 5-aminolevulinate dehydratase = porphobilinogen synthase (VIMSS), at 387,977 to 388,951
hemB
b4580: yaiT - no description, at 389,475 to 390,932
yaiT
Position (kb) 387
388
389 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 387.043 kb on - strand at 387.266 kb on + strand, within tauD at 387.266 kb on + strand, within tauD at 387.410 kb on + strand, within tauD at 387.622 kb on + strand, within tauD at 387.649 kb on + strand, within tauD at 387.649 kb on + strand, within tauD at 387.669 kb on - strand, within tauD at 387.678 kb on + strand, within tauD at 387.775 kb on + strand, within tauD at 387.775 kb on + strand, within tauD at 387.783 kb on - strand, within tauD at 387.896 kb on + strand at 387.908 kb on + strand at 387.908 kb on + strand at 387.916 kb on - strand at 387.916 kb on - strand at 387.916 kb on - strand at 388.942 kb on + strand at 388.947 kb on + strand at 388.947 kb on + strand at 388.947 kb on + strand at 388.986 kb on + strand at 388.992 kb on - strand at 388.992 kb on - strand at 388.992 kb on - strand at 388.992 kb on - strand at 388.992 kb on - strand at 388.992 kb on - strand at 388.993 kb on - strand at 388.994 kb on - strand at 389.000 kb on + strand at 389.000 kb on + strand at 389.008 kb on - strand at 389.008 kb on - strand at 389.032 kb on + strand at 389.035 kb on + strand at 389.057 kb on + strand at 389.158 kb on + strand at 389.465 kb on - strand at 389.468 kb on - strand at 389.488 kb on - strand at 389.520 kb on + strand at 389.539 kb on - strand at 389.540 kb on + strand at 389.541 kb on + strand at 389.541 kb on + strand at 389.546 kb on + strand at 389.546 kb on + strand at 389.546 kb on + strand at 389.546 kb on + strand at 389.546 kb on + strand at 389.549 kb on - strand at 389.554 kb on - strand at 389.554 kb on - strand at 389.554 kb on - strand at 389.554 kb on - strand at 389.554 kb on - strand at 389.559 kb on + strand at 389.569 kb on - strand at 389.573 kb on + strand at 389.573 kb on + strand at 389.573 kb on + strand at 389.603 kb on + strand at 389.604 kb on + strand at 389.612 kb on - strand at 389.612 kb on - strand at 389.613 kb on + strand at 389.613 kb on + strand at 389.618 kb on + strand at 389.621 kb on - strand, within yaiT at 389.629 kb on + strand, within yaiT at 389.629 kb on + strand, within yaiT at 389.629 kb on + strand, within yaiT at 389.629 kb on + strand, within yaiT at 389.632 kb on + strand, within yaiT at 389.632 kb on + strand, within yaiT at 389.632 kb on + strand, within yaiT at 389.632 kb on + strand, within yaiT at 389.637 kb on + strand, within yaiT at 389.637 kb on + strand, within yaiT at 389.645 kb on - strand, within yaiT at 389.647 kb on + strand, within yaiT at 389.647 kb on + strand, within yaiT at 389.647 kb on + strand, within yaiT at 389.647 kb on + strand, within yaiT at 389.647 kb on + strand, within yaiT at 389.649 kb on - strand, within yaiT at 389.664 kb on - strand, within yaiT at 389.675 kb on + strand, within yaiT at 389.706 kb on + strand, within yaiT at 389.706 kb on + strand, within yaiT at 389.713 kb on + strand, within yaiT at 389.713 kb on - strand, within yaiT at 389.740 kb on + strand, within yaiT at 389.746 kb on + strand, within yaiT at 389.746 kb on + strand, within yaiT at 389.751 kb on + strand, within yaiT at 389.765 kb on + strand, within yaiT at 389.768 kb on + strand, within yaiT at 389.768 kb on + strand, within yaiT at 389.770 kb on + strand, within yaiT at 389.770 kb on + strand, within yaiT at 389.770 kb on + strand, within yaiT at 389.778 kb on - strand, within yaiT at 389.778 kb on - strand, within yaiT at 389.783 kb on + strand, within yaiT at 389.795 kb on - strand, within yaiT at 389.797 kb on + strand, within yaiT at 389.852 kb on + strand, within yaiT at 389.880 kb on + strand, within yaiT at 389.888 kb on + strand, within yaiT at 389.908 kb on + strand, within yaiT at 389.908 kb on + strand, within yaiT at 389.908 kb on + strand, within yaiT at 389.910 kb on + strand, within yaiT at 389.910 kb on + strand, within yaiT at 389.911 kb on + strand, within yaiT at 389.911 kb on + strand, within yaiT at 389.914 kb on - strand, within yaiT at 389.914 kb on - strand, within yaiT at 389.915 kb on + strand, within yaiT at 389.915 kb on + strand, within yaiT at 389.916 kb on - strand, within yaiT at 389.916 kb on - strand, within yaiT at 389.918 kb on + strand, within yaiT at 389.935 kb on + strand, within yaiT
Per-strain Table
Position Strand Gene LocusTag Fraction 2,4-Dinitrophenol 2 mM remove 387,043 - +0.8 387,266 + tauD b0368 0.29 -2.5 387,266 + tauD b0368 0.29 -0.4 387,410 + tauD b0368 0.46 -0.7 387,622 + tauD b0368 0.71 -0.1 387,649 + tauD b0368 0.74 +1.8 387,649 + tauD b0368 0.74 -0.8 387,669 - tauD b0368 0.76 +1.3 387,678 + tauD b0368 0.77 -1.2 387,775 + tauD b0368 0.89 -1.1 387,775 + tauD b0368 0.89 -0.1 387,783 - tauD b0368 0.90 -1.7 387,896 + -0.6 387,908 + +0.4 387,908 + +0.2 387,916 - -0.3 387,916 - +0.3 387,916 - +0.8 388,942 + -3.6 388,947 + -1.3 388,947 + +0.3 388,947 + +1.2 388,986 + -0.8 388,992 - -0.8 388,992 - -0.4 388,992 - -0.3 388,992 - -2.9 388,992 - -0.1 388,992 - -0.1 388,993 - -0.1 388,994 - -0.5 389,000 + +0.5 389,000 + +0.3 389,008 - -0.3 389,008 - +0.4 389,032 + +0.1 389,035 + -1.6 389,057 + +1.1 389,158 + -1.0 389,465 - +0.5 389,468 - +0.1 389,488 - +0.7 389,520 + -0.2 389,539 - +0.7 389,540 + +0.4 389,541 + +1.0 389,541 + -0.2 389,546 + +0.4 389,546 + +0.3 389,546 + +0.5 389,546 + +0.6 389,546 + -0.5 389,549 - +0.2 389,554 - -0.6 389,554 - +0.5 389,554 - +0.1 389,554 - -0.2 389,554 - +0.1 389,559 + +0.0 389,569 - -0.6 389,573 + +0.3 389,573 + -0.1 389,573 + +0.7 389,603 + -0.2 389,604 + -0.1 389,612 - +0.3 389,612 - +0.1 389,613 + +0.9 389,613 + +0.0 389,618 + -0.2 389,621 - yaiT b4580 0.10 -1.0 389,629 + yaiT b4580 0.11 +0.2 389,629 + yaiT b4580 0.11 -0.1 389,629 + yaiT b4580 0.11 +0.2 389,629 + yaiT b4580 0.11 +0.0 389,632 + yaiT b4580 0.11 -0.6 389,632 + yaiT b4580 0.11 -0.0 389,632 + yaiT b4580 0.11 +0.2 389,632 + yaiT b4580 0.11 +0.2 389,637 + yaiT b4580 0.11 -0.4 389,637 + yaiT b4580 0.11 -0.2 389,645 - yaiT b4580 0.12 -0.7 389,647 + yaiT b4580 0.12 +0.1 389,647 + yaiT b4580 0.12 +0.4 389,647 + yaiT b4580 0.12 -1.7 389,647 + yaiT b4580 0.12 +0.1 389,647 + yaiT b4580 0.12 +0.3 389,649 - yaiT b4580 0.12 -0.4 389,664 - yaiT b4580 0.13 +1.0 389,675 + yaiT b4580 0.14 +0.1 389,706 + yaiT b4580 0.16 -0.2 389,706 + yaiT b4580 0.16 +0.3 389,713 + yaiT b4580 0.16 +1.3 389,713 - yaiT b4580 0.16 -0.1 389,740 + yaiT b4580 0.18 +0.1 389,746 + yaiT b4580 0.19 +1.1 389,746 + yaiT b4580 0.19 -0.4 389,751 + yaiT b4580 0.19 +0.6 389,765 + yaiT b4580 0.20 +0.5 389,768 + yaiT b4580 0.20 +0.6 389,768 + yaiT b4580 0.20 +0.1 389,770 + yaiT b4580 0.20 +0.6 389,770 + yaiT b4580 0.20 +0.3 389,770 + yaiT b4580 0.20 +0.8 389,778 - yaiT b4580 0.21 -0.9 389,778 - yaiT b4580 0.21 +0.4 389,783 + yaiT b4580 0.21 +0.4 389,795 - yaiT b4580 0.22 +0.0 389,797 + yaiT b4580 0.22 -0.4 389,852 + yaiT b4580 0.26 -0.4 389,880 + yaiT b4580 0.28 +0.2 389,888 + yaiT b4580 0.28 -0.8 389,908 + yaiT b4580 0.30 -0.5 389,908 + yaiT b4580 0.30 -0.1 389,908 + yaiT b4580 0.30 -0.4 389,910 + yaiT b4580 0.30 +0.7 389,910 + yaiT b4580 0.30 +0.9 389,911 + yaiT b4580 0.30 +0.5 389,911 + yaiT b4580 0.30 +0.1 389,914 - yaiT b4580 0.30 -0.5 389,914 - yaiT b4580 0.30 +0.2 389,915 + yaiT b4580 0.30 +0.5 389,915 + yaiT b4580 0.30 -0.4 389,916 - yaiT b4580 0.30 -0.4 389,916 - yaiT b4580 0.30 +0.2 389,918 + yaiT b4580 0.30 +1.3 389,935 + yaiT b4580 0.32 -1.1
Or see this region's nucleotide sequence